RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 PAF1Q8N7H5 531 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 ATL2Q8NHH9 583 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 ENOX1Q8TC92 643 aaKnown RBP8.11□□□□□ -1.11
VIM-202ENST00000421459 GPBAR1Q8TDU6 330 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 FNIP1Q8TF40 1166 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 ZDHHC1Q8WTX9 485 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 PDCD6IPQ8WUM4 868 aaKnown RBP8.11□□□□□ -1.11
VIM-202ENST00000421459 NKD1Q969G9 470 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 CCDC74BQ96LY2 380 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 COQ10AQ96MF6 247 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 TUBGCP5Q96RT8 1024 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 CMKLR1Q99788 373 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 CNPY3Q9BT09 278 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 SNRNP25Q9BV90 132 aaKnown RBP8.11□□□□□ -1.11
VIM-202ENST00000421459 CINPQ9BW66 212 aaPredicted RBP8.11□□□□□ -1.11
VIM-202ENST00000421459 NUP62CLQ9H1M0 184 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 WDR26Q9H7D7 661 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 ATP13A3Q9H7F0 1226 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 ETNK2Q9NVF9 386 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 OCIAD1Q9NX40 245 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 SEPT10Q9P0V9 454 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 TAAR2Q9P1P5 351 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 SUFUQ9UMX1 484 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 TMEM98Q9Y2Y6 226 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 PCDHB11Q9Y5F2 797 aa8.11□□□□□ -1.11
VIM-202ENST00000421459 UBR5O95071 2799 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 A0A1W2PQC6 194 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CFAP69A5D8W1 941 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 GOLGA6CA6NDK9 693 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 GOLGA6BA6NDN3 693 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ARHGAP42A6NI28 874 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 TNFRSF10CO14798 259 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 FGF10O15520 208 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 NUDT21O43809 227 aaKnown RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 CPNE6O95741 557 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 EML2O95834 649 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ITGB2P05107 769 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 HOXC4P09017 264 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 GOLGA6DP0CG33 693 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 LIFP15018 202 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 TCF4P15884 667 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 PNLIPP16233 465 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CTPS1P17812 591 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 LHCGRP22888 699 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 PSMA2P25787 234 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CSF2RBP32927 897 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CSNK1DP48730 415 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 MAXP61244 160 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CTBSQ01459 385 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 TLE1Q04724 770 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 SRSF1Q07955 248 aaKnown RBP eCLIP8.1□□□□□ -1.11
VIM-202ENST00000421459 MAMLD1Q13495 774 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 GRM3Q14832 879 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 IGFBP7Q16270 282 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 SKIDA1Q1XH10 827 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 PPP6R3Q5H9R7 873 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 FAM182AQ5T1J6 154 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ERMARDQ5T6L9 678 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ACAD10Q6JQN1 1059 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 DOK6Q6PKX4 331 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ATG14Q6ZNE5 492 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 RFX8Q6ZV50 586 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 Q6ZVL8 140 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 MARK2Q7KZI7 788 aaKnown RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 TSPAN33Q86UF1 283 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 TRIM74Q86UV6 250 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 C17orf82Q86X59 251 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 NAGSQ8N159 534 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 NEK11Q8NG66 645 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ART4Q93070 314 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 NUS1Q96E22 293 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CTRCQ99895 268 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 SLC12A9Q9BXP2 914 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 FRMD8Q9BZ67 464 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 SP110Q9HB58 689 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 GOLGA6AQ9NYA3 693 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CWC15Q9P013 229 aaKnown RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 DACH1Q9UI36 760 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 CD84Q9UIB8 345 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 PCYT1BQ9Y5K3 369 aaPredicted RBP8.1□□□□□ -1.11
VIM-202ENST00000421459 B3GALT1Q9Y5Z6 326 aa8.1□□□□□ -1.11
VIM-202ENST00000421459 ANKRD62A6NC57 917 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 NPIPB15A6NHN6 443 aaPredicted RBP8.09□□□□□ -1.11
VIM-202ENST00000421459 A8MU76 341 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 NKX2-8O15522 239 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 DUX1O43812 170 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 HEXIM1O94992 359 aaKnown RBP8.09□□□□□ -1.11
VIM-202ENST00000421459 PEX11BO96011 259 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 CPP00450 1065 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 MYCLP1P12525 358 aaPredicted RBP8.09□□□□□ -1.11
VIM-202ENST00000421459 AMPD1P23109 780 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 KELP23276 732 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 MIPP30301 263 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 VIPR1P32241 457 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 UGT1A3P35503 534 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 ADCY8P40145 1251 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 UBXN1Q04323 297 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 IL10RBQ08334 325 aa8.09□□□□□ -1.11
VIM-202ENST00000421459 NSUN2Q08J23 767 aaKnown RBP eCLIP8.09□□□□□ -1.11
VIM-202ENST00000421459 TRAF2Q12933 501 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms