RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 SH3BGRLO75368 114 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CA3P07451 260 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ATP13A5Q4VNC0 1218 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 R3HCC1LQ7Z5L2 792 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CAVIN3Q969G5 261 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ZBED3Q96IU2 234 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 C10orf88Q9H8K7 445 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 PRMT5O14744 637 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 OTCP00480 354 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ZSCAN5DPP0CG00 497 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 PDE1CQ14123 709 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 FBXW10Q5XX13 1052 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 KRT73Q86Y46 540 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 EFCAB3Q8N7B9 438 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 PSMG2Q969U7 264 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 OTUB2Q96DC9 234 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 REXO5Q96IC2 774 aaKnown RBP10.75□□□□□ -0.69
PTCH1-206ENST00000421141 PCBD2Q9H0N5 130 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CCSER2Q9H7U1 834 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 CNTRLQ7Z7A1 2325 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 LRCH4O75427 683 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 GSNP06396 782 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 GNPDA1P46926 289 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 EBF3Q9H4W6 596 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 SIRPGQ9P1W8 387 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 KLHL3Q9UH77 587 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 RABGEF1Q9UJ41 708 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 RREB1Q92766 1687 aa10.75□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF682O95780 498 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 AADACL2Q6P093 401 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 TMC3Q7Z5M5 1100 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 DAW1Q8N136 415 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 SLC4A5Q9BY07 1137 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 SMOC2Q9H3U7 446 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 OR10H1Q9Y4A9 318 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 COL24A1Q17RW2 1714 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 C2CD4BA6NLJ0 364 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 PAPSS1O43252 624 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 HAPLN1P10915 354 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 IMPDH2P12268 514 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 NOS3P29474 1203 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 IFNGR2P38484 337 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 MAGEA11P43364 429 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 CHRNB3Q05901 458 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 IRGCQ6NXR0 463 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 DSELQ8IZU8 1212 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 TTC29Q8NA56 475 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF514Q96K75 400 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ADAMTS10Q9H324 1103 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 PNPLA8Q9NP80 782 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 NOP53Q9NZM5 478 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ILVBLA1L0T0 632 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 PMM2O15305 246 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 RPL22P35268 128 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 NEK3P51956 506 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 AQP5P55064 265 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 AGKQ53H12 422 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 AGGF1Q8N302 714 aaeCLIP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 FAM120BQ96EK7 910 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 SEC16BQ96JE7 1060 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 P2RY13Q9BPV8 354 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 RHOBTB2Q9BYZ6 727 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 NMUR1Q9HB89 426 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 CD84Q9UIB8 345 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 CORO2BQ9UQ03 480 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 TBX18O95935 607 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 HIST1H2ABP04908 130 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 TSHRP16473 764 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 TFE3P19532 575 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 HNRNPH3P31942 346 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ZBTB17Q13105 803 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 FAAH2Q6GMR7 532 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 HIST3H2AQ7L7L0 130 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 HIST1H2ACQ93077 130 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 KCTD14Q9BQ13 255 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 DNAJB4Q9UDY4 337 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 LOC100653049A0A140TA62 436 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 WNT9AO14904 365 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 PHGDHO43175 533 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 KRT34O76011 436 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 RPSAP08865 295 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 SPDYCQ5MJ68 293 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 C11orf74Q86VG3 221 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 LCN9Q8WX39 176 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 C8orf33Q9H7E9 229 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 NCDNQ9UBB6 729 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 WNT6Q9Y6F9 365 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 H3BNH8 94 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 SLC25A12O75746 678 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF621Q6ZSS3 439 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF248Q8NDW4 579 aa10.74□□□□□ -0.69
PTCH1-206ENST00000421141 ZNF473Q8WTR7 871 aaKnown RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-206ENST00000421141 CDH3P22223 829 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 CRYBG2Q8N1P7 616 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 ACMSDQ8TDX5 336 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 TFAP2BQ92481 460 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 FAM84AQ96KN4 292 aa10.73□□□□□ -0.69
PTCH1-206ENST00000421141 SEMA4AQ9H3S1 761 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms