RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 KLK10O43240 276 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 ZFC3H1O60293 1989 aaKnown RBP20.4■□□□□ 0.86
MCF2L-212ENST00000420013 CYP1A2P05177 515 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 KRT10P13645 584 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 HADHQ16836 314 aaKnown RBP20.4■□□□□ 0.86
MCF2L-212ENST00000420013 C14orf28Q4W4Y0 310 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 OGFOD3Q6PK18 319 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 TAF8Q7Z7C8 310 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 CCNJLQ8IV13 435 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 PGBD5Q8N414 524 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 FAM71BQ8TC56 605 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 PDCD6IPQ8WUM4 868 aaKnown RBP20.4■□□□□ 0.86
MCF2L-212ENST00000420013 SNRNP27Q8WVK2 155 aaKnown RBP20.4■□□□□ 0.86
MCF2L-212ENST00000420013 GCN1Q92616 2671 aaKnown RBP20.4■□□□□ 0.86
MCF2L-212ENST00000420013 NUP85Q9BW27 656 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 CBX8Q9HC52 389 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 RABGEF1Q9UJ41 708 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 PCDHGC4Q9Y5F7 938 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 ATMQ13315 3056 aa20.4■□□□□ 0.86
MCF2L-212ENST00000420013 PLD2O14939 933 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 NOBOXO60393 691 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 RPLP0P05388 317 aaKnown RBP20.39■□□□□ 0.85
MCF2L-212ENST00000420013 INHBCP55103 352 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 UBASH3AP57075 661 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 TRAF2Q12933 501 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 ARHGEF7Q14155 803 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 KRT81Q14533 505 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 TCEA2Q15560 299 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 ARMC12Q5T9G4 340 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 KCTD16Q68DU8 428 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 LUZP1Q86V48 1076 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 TMEM159Q96B96 161 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 SCRN2Q96FV2 425 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 WBP1Q96G27 269 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 TEX101Q9BY14 249 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 LRRN3Q9H3W5 708 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 NOD2Q9HC29 1040 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 CYP4F12Q9HCS2 524 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 AMACRQ9UHK6 382 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 LCMT1Q9UIC8 334 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 DNPEPQ9ULA0 475 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 CAPN11Q9UMQ6 739 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 PPIL1Q9Y3C6 166 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 PCDHGA7Q9Y5G6 932 aa20.39■□□□□ 0.85
MCF2L-212ENST00000420013 A0A1W2PQM1 296 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 MYO1FO00160 1098 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 NUDT21O43809 227 aaKnown RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 PGLSO95336 258 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 PTMSP20962 102 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 LHCGRP22888 699 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 C19orf57Q0VDD7 668 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 PEX6Q13608 980 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 HLTFQ14527 1009 aaKnown RBP eCLIP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 SPECC1LQ69YQ0 1117 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 TXNRD3NBQ6F5E7 133 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 ALG1LQ6GMV1 187 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 TIGD7Q6NT04 549 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 ALKBH5Q6P6C2 394 aaKnown RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 HEATR4Q86WZ0 1026 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 NDUFAF2Q8N183 169 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 TEX26Q8N6G2 289 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 FAM46DQ8NEK8 389 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 FATE1Q969F0 183 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 ZNF670Q9BS34 389 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 GSDMCQ9BYG8 508 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 FRMD8Q9BZ67 464 aaPredicted RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 POLR1EQ9GZS1 481 aaKnown RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 TMEM168Q9H0V1 697 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 EPB41L5Q9HCM4 733 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 MRPL40Q9NQ50 206 aaKnown RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 TRNAU1APQ9NX07 287 aaKnown RBP20.38■□□□□ 0.85
MCF2L-212ENST00000420013 ACSL6Q9UKU0 697 aa20.38■□□□□ 0.85
MCF2L-212ENST00000420013 A0A087X0T9 212 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 CAPN8A6NHC0 703 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 B4DGG1 531 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 MFSD11O43934 449 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 TNFSF15O95150 251 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 FAM228BP0C875 321 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 CCNB1P14635 433 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 ZNF30P17039 623 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 CCL7P80098 99 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 DPTQ07507 201 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 VAC14Q08AM6 782 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 GALNT2Q10471 571 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 ILF3Q12906 894 aaKnown RBP eCLIP20.37■□□□□ 0.85
MCF2L-212ENST00000420013 RAB11FIP2Q7L804 512 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 SPRED1Q7Z699 444 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 B3GNT8Q7Z7M8 397 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 CBARPQ8N350 705 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-212ENST00000420013 ZNF564Q8TBZ8 553 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-212ENST00000420013 CPLX3Q8WVH0 158 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 LGR4Q9BXB1 951 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 LUC7L2Q9Y383 392 aaKnown RBP20.37■□□□□ 0.85
MCF2L-212ENST00000420013 AHCTF1Q8WYP5 2266 aa20.37■□□□□ 0.85
MCF2L-212ENST00000420013 COL6A6A6NMZ7 2263 aa20.36■□□□□ 0.85
MCF2L-212ENST00000420013 NPIPB15A6NHN6 443 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-212ENST00000420013 GYPCP04921 128 aa20.36■□□□□ 0.85
MCF2L-212ENST00000420013 PYGLP06737 847 aa20.36■□□□□ 0.85
MCF2L-212ENST00000420013 CA4P22748 312 aa20.36■□□□□ 0.85
MCF2L-212ENST00000420013 GARSP41250 739 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms