RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GAGE12FP0CL80 117 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GAGE12GP0CL81 117 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GAGE12IP0CL82 117 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 IRF1P10914 325 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GABRB2P47870 512 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 PIP4K2AP48426 406 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 CEBPZQ03701 1054 aaKnown RBP4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GAGE1Q13065 139 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GAGE4Q13068 117 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 NAE1Q13564 534 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 CALCRLQ16602 461 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 TSTQ16762 297 aaKnown RBP4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 ATP13A5Q4VNC0 1218 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 JAKMIP3Q5VZ66 844 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 PLEKHA7Q6IQ23 1121 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF280DQ6N043 979 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 SPSB3Q6PJ21 355 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 SLC36A4Q6YBV0 504 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 NEK10Q6ZWH5 1172 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF771Q7L3S4 317 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 TAOK1Q7L7X3 1001 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 CCDC13Q8IYE1 715 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 SPATA6LQ8N4H0 392 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 PCYOX1LQ8NBM8 494 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 NAXEQ8NCW5 288 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 TANKQ92844 425 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 GTF3C6Q969F1 213 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 BICD1Q96G01 975 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 PPM1MQ96MI6 270 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 C17orf75Q9HAS0 396 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 HINT3Q9NQE9 182 aaKnown RBP4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF224Q9NZL3 707 aa4.46□□□□□ -1.7
HMGB1P49-201ENST00000418882 A0A1W2PPH5 198 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 TBX18O95935 607 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 SNRNP70P08621 437 aaKnown RBP4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 IL7RP16871 459 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 CD58P19256 250 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 PBX3P40426 434 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 METAP2P50579 478 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 GAS1P54826 345 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 RPL36AP83881 106 aaKnown RBP4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 TMEM115Q12893 351 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZBTB17Q13105 803 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 TBCEQ15813 527 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 GSTA3Q16772 222 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 CDC73Q6P1J9 531 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 PQLC2Q6ZP29 291 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 WDR63Q8IWG1 891 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 ODF3L1Q8IXM7 274 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 DSELQ8IZU8 1212 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 DUSP19Q8WTR2 217 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 SORCS1Q8WY21 1168 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 RHBDF1Q96CC6 855 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 SAAL1Q96ER3 474 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 IGSF21Q96ID5 467 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 IL17FQ96PD4 163 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 KXD1Q9BQD3 176 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 MMTAG2Q9BU76 263 aaKnown RBP4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 CSTL1Q9H114 145 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 JMJD4Q9H9V9 463 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 TAS2R10Q9NYW0 307 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 SMARCAL1Q9NZC9 954 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 SIX4Q9UIU6 781 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 TMEM98Q9Y2Y6 226 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 CNTNAP2Q9UHC6 1331 aa4.45□□□□□ -1.7
HMGB1P49-201ENST00000418882 A0A087WYN8 130 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 SAA2-SAA4A0A096LPE2 208 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 MAGEA13PA6NCF6 341 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 LRRC53A6NM62 1247 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 VCYO14598 125 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 PAGE4O60829 102 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 RFPL2O75678 378 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 HOXB5P09067 269 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 SRCP12931 536 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 DAOP14920 347 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 PEX5P50542 639 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 EIF3BP55884 814 aaKnown RBP4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 MPP1Q00013 466 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 SLC20A2Q08357 652 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 DCTN2Q13561 401 aaKnown RBP4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 ATF7IPQ6VMQ6 1270 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 NR2C2APQ86WQ0 139 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 ZNF34Q8IZ26 560 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 HMGCLL1Q8TB92 370 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 WFIKKN2Q8TEU8 576 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 MTBPQ96DY7 904 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 GRAMD2BQ96HH9 432 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 OR1F2PQ96R84 312 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 SLC26A6Q9BXS9 759 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 NDST4Q9H3R1 872 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 RETREG1Q9H6L5 497 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 SEBOXQ9HB31 216 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 ASAH2Q9NR71 780 aa4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 AAR2Q9Y312 384 aaKnown RBP4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 ATXN2Q99700 1313 aaKnown RBP4.44□□□□□ -1.7
HMGB1P49-201ENST00000418882 EME2A4GXA9 379 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 HNRNPCL2B2RXH8 293 aa4.43□□□□□ -1.7
HMGB1P49-201ENST00000418882 J3KRW8 73 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms