RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PLEKHG6Q3KR16 790 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 PPM1LQ5SGD2 360 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 RETSATQ6NUM9 610 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 KLC3Q6P597 504 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 EPGNQ6UW88 154 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 LINGO4Q6UY18 593 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 SDCCAG8Q86SQ7 713 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 SLC22A9Q8IVM8 553 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 PARP9Q8IXQ6 854 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 LSMEM2Q8N112 164 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 KIAA1958Q8N8K9 716 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF557Q8N988 423 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 TXNDC5Q8NBS9 432 aaKnown RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 LPCAT1Q8NF37 534 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 OR4K2Q8NGD2 314 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 MAGEC3Q8TD91 643 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 SLC22A17Q8WUG5 538 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 LPGAT1Q92604 370 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ISG20Q96AZ6 181 aaKnown RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 RMDN1Q96DB5 314 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 NSL1Q96IY1 281 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 SCYL1Q96KG9 808 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 NDNQ99608 321 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 EBF4Q9BQW3 602 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 SUDS3Q9H7L9 328 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 MAGEE1Q9HCI5 957 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 GPAMQ9HCL2 828 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 TLR9Q9NR96 1032 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 ABCB8Q9NUT2 735 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 PNPOQ9NVS9 261 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 POLR3BQ9NW08 1133 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 KIAA1522Q9P206 1035 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 MARCOQ9UEW3 520 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 APOBEC2Q9Y235 224 aaKnown RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 HS3ST2Q9Y278 367 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 SLC4A7Q9Y6M7 1214 aa9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 MUC22E2RYF6 1773 aaPredicted RBP9.06□□□□□ -0.96
LINCMD1-201ENST00000418518 DENND4AQ7Z401 1863 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 HIDE1A8MVS5 230 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 F8W8V4 182 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 SLCO1B7G3V0H7 640 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 HGSO14964 777 aaPredicted RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 CCL16O15467 120 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF821O75541 412 aaPredicted RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 HSPA4LO95757 839 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 RB1P06400 928 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PIRTP0C851 137 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF37AP17032 561 aaPredicted RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PTPN2P17706 415 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 SAT1P21673 171 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 GLRBP48167 497 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 IDH3AP50213 366 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 LBX1P52954 281 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PGGT1BP53609 377 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 XIAPP98170 497 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 CSHL1Q14406 222 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PTPRCAPQ14761 206 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF77Q15935 545 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 AARS2Q5JTZ9 985 aaKnown RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PRSS36Q5K4E3 855 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ARMC12Q5T9G4 340 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 METTL21CQ5VZV1 264 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PLPP4Q5VZY2 271 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 TMEM207Q6UWW9 146 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 TREML1Q86YW5 311 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 KIRREL3Q8IZU9 778 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 CMTM8Q8IZV2 173 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 APCDD1Q8J025 514 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 KIF2BQ8N4N8 673 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF781Q8N8C0 355 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 RHEBL1Q8TAI7 183 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 GRIN3AQ8TCU5 1115 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 SH3RF2Q8TEC5 729 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 DDI1Q8WTU0 396 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PIH1D2Q8WWB5 315 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 VOPP1Q96AW1 172 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 MYO19Q96H55 970 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 LYSMD1Q96S90 227 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 CORO1BQ9BR76 489 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 TBC1D10AQ9BXI6 508 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ILKAPQ9H0C8 392 aaPredicted RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 MMADHCQ9H3L0 296 aaPredicted RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 MAN1C1Q9NR34 630 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 MARK1Q9P0L2 795 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 IL17CQ9P0M4 197 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 CPSF2Q9P2I0 782 aaKnown RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 VTI1BQ9UEU0 232 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PRKAG2Q9UGJ0 569 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 INTS6Q9UL03 887 aaKnown RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 MED16Q9Y2X0 877 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 FCF1Q9Y324 198 aaKnown RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PPIL1Q9Y3C6 166 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 ZNF711Q9Y462 761 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PCDHGC4Q9Y5F7 938 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 COMMD10Q9Y6G5 202 aa9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 PRRC2BQ5JSZ5 2229 aaKnown RBP9.05□□□□□ -0.96
LINCMD1-201ENST00000418518 COL4A3Q01955 1670 aa9.04□□□□□ -0.96
LINCMD1-201ENST00000418518 LINC01553A4QN01 128 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms