RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 WASF2Q9Y6W5 498 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 RAD51BO15315 384 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 IRAK2O43187 625 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 CCNCP24863 283 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 WASHC5Q12768 1159 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 FAM98BQ52LJ0 330 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 RD3Q7Z3Z2 195 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 AMIGO2Q86SJ2 522 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 ANKRD6Q9Y2G4 727 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 TCRBV7S2A1N4TA0A589 114 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 RPN2P04844 631 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 ERVK-10P10266 1014 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 GRIA3P42263 894 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 TTPAP49638 278 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 NAA20P61599 178 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 CNPY1Q3B7I2 92 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 ARCQ7LC44 396 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 ZNF572Q7Z3I7 529 aaPredicted RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 SYTL1Q8IYJ3 562 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 RTL3Q8N8U3 475 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 BORCS5Q969J3 196 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 IGSF21Q96ID5 467 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 ZFP14Q9HCL3 533 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 IL23AQ9NPF7 189 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 DUS2Q9NX74 493 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 A0A1W2PQ67 120 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 BCLAF3A2AJT9 711 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 TPD52L2O43399 206 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 SPDYE7PQ495Y7 208 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 AFTPHQ6ULP2 937 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 UTS2BQ765I0 119 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 OSTM1Q86WC4 334 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 MARK4Q96L34 752 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 DEPDC7Q96QD5 511 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 HAPLN3Q96S86 360 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 FIZ1Q96SL8 496 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 CLK4Q9HAZ1 481 aaKnown RBP12.84□□□□□ -0.35
SCAF8-203ENST00000417268 TLR9Q9NR96 1032 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 PHF24Q9UPV7 400 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 TLR6Q9Y2C9 796 aa12.84□□□□□ -0.35
SCAF8-203ENST00000417268 RGSL1A5PLK6 1076 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 MSX2P35548 267 aaPredicted RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 CCNFP41002 786 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 CRADDP78560 199 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 VAC14Q08AM6 782 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 DGCR6Q14129 220 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 ASTE1Q2TB18 679 aaPredicted RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PKN3Q6P5Z2 889 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 TRAPPC5Q8IUR0 188 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 MIER2Q8N344 545 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 NIPA2Q8N8Q9 360 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 SMG8Q8ND04 991 aaKnown RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 CLEC4CQ8WTT0 213 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 SLC35F5Q8WV83 523 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 OSBPL11Q9BXB4 747 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 RAD21L1Q9H4I0 556 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 ACTR8Q9H981 624 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FBXO10Q9UK96 956 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PSMD13Q9UNM6 376 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 CRYL1Q9Y2S2 319 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FMO4P31512 558 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 HALP42357 657 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 NDST2P52849 883 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PRKAA2P54646 552 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PRMT9Q6P2P2 845 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FAM9CQ8IZT9 166 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 ATG16L2Q8NAA4 619 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 NETO2Q8NC67 525 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 BORCS6Q96GS4 357 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 QSOX1O00391 747 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FANCGO15287 622 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 BUD23O43709 281 aaKnown RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 MAGEC1O60732 1142 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 RABGGTBP53611 331 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 NAGLUP54802 743 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 SATL1Q86VE3 508 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 ZNF280BQ86YH2 543 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FLCNQ8NFG4 579 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 LRRN4Q8WUT4 740 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 SPATA17Q96L03 361 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 YIPF2Q9BWQ6 316 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 C12orf65Q9H3J6 166 aaKnown RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PNPLA8Q9NP80 782 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 TMPRSS4Q9NRS4 437 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FZD10Q9ULW2 581 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 FAM95CA0A1B0GW59 222 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 CAPN1P07384 714 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 CCNA2P20248 432 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 HOXA11P31270 313 aaPredicted RBP12.83□□□□□ -0.36
SCAF8-203ENST00000417268 MAGEA11P43364 429 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 PSME3P61289 254 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 UPP1Q16831 310 aa12.83□□□□□ -0.36
SCAF8-203ENST00000417268 SPANXN2Q5MJ10 180 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms