RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ANKRD20A8PQ5CZ79 823 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 DENND2CQ68D51 928 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 KCTD16Q68DU8 428 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 NCBP2-AS2Q69YL0 99 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 SPACA3Q8IXA5 215 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 PELI3Q8N2H9 469 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 CTNNBL1Q8WYA6 563 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 CCDC74AQ96AQ1 378 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 SEMA3CQ99985 751 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 ZNF670Q9BS34 389 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 LGR4Q9BXB1 951 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 POLR1EQ9GZS1 481 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 SYNDIG1Q9H7V2 258 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 CYP4F12Q9HCS2 524 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 ASCL3Q9NQ33 180 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 MRPL40Q9NQ50 206 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 HAUS2Q9NVX0 235 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 MOSPD1Q9UJG1 213 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 PCDHGA8Q9Y5G5 932 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 RAI2Q9Y5P3 530 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 KIF26BQ2KJY2 2108 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 UNC13CQ8NB66 2214 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 TMX2-CTNND1H3BSU7 103 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 MATN3O15232 486 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 MFSD11O43934 449 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 KRT7P08729 469 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 CCNCP24863 283 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 TEAD1P28347 426 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 GJC1P36383 396 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 GALNT2Q10471 571 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 SKOR2Q2VWA4 1001 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 USP45Q70EL2 814 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 FAM46DQ8NEK8 389 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 OR8K1Q8NGG5 319 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 WDR36Q8NI36 951 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 PIH1D2Q8WWB5 315 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 MAML1Q92585 1016 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 DTD2Q96FN9 168 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 SLC46A1Q96NT5 459 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 TSGA13Q96PP4 275 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 MCCC1Q96RQ3 725 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 UBL7Q96S82 380 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 TEX101Q9BY14 249 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 TMEM168Q9H0V1 697 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 AMACRQ9UHK6 382 aa17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 ARHGEF17Q96PE2 2063 aaPredicted RBP17.59■□□□□ 0.41
PDLIM2-208ENST00000416159 LAMA5O15230 3695 aa17.58■□□□□ 0.41
PDLIM2-208ENST00000416159 ATRXP46100 2492 aa17.58■□□□□ 0.41
PDLIM2-208ENST00000416159 CELSR3Q9NYQ7 3312 aa17.58■□□□□ 0.41
PDLIM2-208ENST00000416159 CCDC187A0A096LP49 1063 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 A0A1W2PNU3 283 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 SSU72P8A0A1W2PR75 194 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 PRSS38A1L453 326 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 NPIPB15A6NHN6 443 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 EIF4E1BA6NMX2 242 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 GLB1P16278 677 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 LHCGRP22888 699 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 ETV3P41162 512 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 MLLT3P42568 568 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 CCL7P80098 99 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 TLE3Q04726 772 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 COL9A2Q14055 689 aaPredicted RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 SPECC1LQ69YQ0 1117 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 HSD11B1LQ7Z5J1 315 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 FATE1Q969F0 183 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 NAF1Q96HR8 494 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 GFM1Q96RP9 751 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 LRRN3Q9H3W5 708 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 DEF6Q9H4E7 631 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 RBM22Q9NW64 420 aaKnown RBP eCLIP17.58■□□□□ 0.44e-6■■■■□ 24.3
PDLIM2-208ENST00000416159 ZNHIT6Q9NWK9 470 aaKnown RBP17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 RABGEF1Q9UJ41 708 aa17.58■□□□□ 0.4
PDLIM2-208ENST00000416159 FZD6O60353 706 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 NOBOXO60393 691 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 RPLP0P05388 317 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 PNLIPP16233 465 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 CTPS1P17812 591 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 MX2P20592 715 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 MAN1A1P33908 653 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 TAS2R40P59535 323 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 DPTQ07507 201 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 ASTE1Q2TB18 679 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 C14orf28Q4W4Y0 310 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 ZFYVE27Q5T4F4 411 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 BROXQ5VW32 411 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 ALG1LQ6GMV1 187 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 RAET1GQ6H3X3 334 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 Q6ZVL8 140 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 GPR155Q7Z3F1 870 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 TECPR1Q7Z6L1 1165 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 TSPAN33Q86UF1 283 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 HEATR4Q86WZ0 1026 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 CPNE8Q86YQ8 564 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 ARL14Q8N4G2 192 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 KCNE4Q8WWG9 221 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 FAF2Q96CS3 445 aa17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 CCDC97Q96F63 343 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 LIN37Q96GY3 246 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 PRR11Q96HE9 360 aaPredicted RBP17.57■□□□□ 0.4
PDLIM2-208ENST00000416159 FCRL3Q96P31 734 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms