RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 C16orf89Q6UX73 402 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 GRASPQ7Z6J2 395 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 LCA5Q86VQ0 697 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 ICA1LQ8NDH6 482 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 FIBINQ8TAL6 211 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 ARRDC2Q8TBH0 407 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 DDI1Q8WTU0 396 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 SMG7Q92540 1137 aaKnown RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 USP13Q92995 863 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 ACDQ96AP0 544 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 RTKNQ9BST9 563 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 FICDQ9BVA6 458 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 KIFC1Q9BW19 673 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 CINPQ9BW66 212 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 UGT1A7Q9HAW7 530 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 UGT1A10Q9HAW8 530 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 UGT1A8Q9HAW9 530 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 PIDD1Q9HB75 910 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 UBP1Q9NZI7 540 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 C6orf203Q9P0P8 240 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 KIAA1522Q9P206 1035 aaPredicted RBP11.62□□□□□ -0.55
RFFL-205ENST00000415395 COPG2Q9UBF2 871 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 OR51B4Q9Y5P0 310 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 COMMD3-BMI1R4GMX3 469 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 C2orf16Q68DN1 1984 aa11.62□□□□□ -0.55
RFFL-205ENST00000415395 CHD7Q9P2D1 2997 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 SMIM31A0A1B0GVY4 71 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 HMX2A2RU54 273 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 SLC9A3R1O14745 358 aaPredicted RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 ZMPSTE24O75844 475 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 MMP2P08253 660 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 SERPINF2P08697 491 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 PIM1P11309 404 aaPredicted RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 UQCRBP14927 111 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 CPA3P15088 417 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 ADSLP30566 484 aaPredicted RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 CD86P42081 329 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 IDH3AP50213 366 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 PLK1P53350 603 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 TUBB3Q13509 450 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 CUL3Q13618 768 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 PDE1CQ14123 709 aaPredicted RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 MAP7Q14244 749 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 PCLAFQ15004 111 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 PCID2Q5JVF3 399 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 DENND5AQ6IQ26 1287 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 ZCCHC23Q6ZST2 131 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 RBM23Q86U06 439 aaKnown RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 PGBD5Q8N414 524 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 RDH11Q8TC12 318 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 SLC26A7Q8TE54 656 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 MRPL38Q96DV4 380 aaKnown RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 FEM1CQ96JP0 617 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 RANBP9Q96S59 729 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 EBF4Q9BQW3 602 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 FEM1AQ9BSK4 669 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 C2orf49Q9BVC5 232 aaPredicted RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 NSMCE4AQ9NXX6 385 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 CDH22Q9UJ99 828 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 MRPS23Q9Y3D9 190 aaKnown RBP11.61□□□□□ -0.55
RFFL-205ENST00000415395 RPS6KL1Q9Y6S9 549 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 MYLKQ15746 1914 aa11.61□□□□□ -0.55
RFFL-205ENST00000415395 SLCO1B7G3V0H7 640 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 CBX4O00257 560 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 CASQ2O14958 399 aaPredicted RBP11.6□□□□□ -0.55
RFFL-205ENST00000415395 BUD23O43709 281 aaKnown RBP11.6□□□□□ -0.55
RFFL-205ENST00000415395 PMPCBO75439 489 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 HSPA4LO95757 839 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 THRAP10827 490 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 NCF2P19878 526 aaPredicted RBP11.6□□□□□ -0.55
RFFL-205ENST00000415395 HLA-DPA1P20036 260 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 NRIP1P48552 1158 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 MAXP61244 160 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ARF5P84085 180 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 DSC2Q02487 901 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 NSUN2Q08J23 767 aaKnown RBP eCLIP11.6□□□□□ -0.55
RFFL-205ENST00000415395 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ANKRD20A4Q4UJ75 823 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 LIN52Q52LA3 116 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 CERCAMQ5T4B2 595 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ZFP1Q6P2D0 407 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 PGM2L1Q6PCE3 622 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 TMEM184AQ6ZMB5 413 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 FBXW8Q8N3Y1 598 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.6□□□□□ -0.55
RFFL-205ENST00000415395 PPHLN1Q8NEY8 458 aaKnown RBP11.6□□□□□ -0.55
RFFL-205ENST00000415395 GDPD5Q8WTR4 605 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ISL2Q96A47 359 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ALG14Q96F25 216 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 CERS2Q96G23 380 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 CLPTM1LQ96KA5 538 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ETAA1Q9NY74 926 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 VPS28Q9UK41 221 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 CCL26Q9Y258 94 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ARIH1Q9Y4X5 557 aaPredicted RBP11.6□□□□□ -0.55
RFFL-205ENST00000415395 TRANK1O15050 2925 aa11.6□□□□□ -0.55
RFFL-205ENST00000415395 ANKRD36A6QL64 1941 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms