RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CTNNA3Q9UI47 895 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ICKQ9UPZ9 632 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 CRYL1Q9Y2S2 319 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 PTGDR2Q9Y5Y4 395 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 IKBKGQ9Y6K9 419 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARHGEF28Q8N1W1 1705 aaKnown RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 A0A1W2PP64 1363 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 RPAP1Q9BWH6 1393 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATP10DQ9P241 1426 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 MLH3Q9UHC1 1453 aa3.86□□□□□ -1.79
HMGB3P23-201ENST00000414981 DLC1Q96QB1 1528 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 A0A1B0GVT2 93 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TSPY2A6NKD2 308 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 I6L893 689 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TULP2O00295 520 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 VWA5AO00534 786 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 ACOT8O14734 319 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CPLX1O14810 134 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SYN3O14994 580 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CTAGE5O15320 804 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TPPPO94811 219 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 METTL18O95568 372 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 DDAH2O95865 285 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TSPY3P0CV98 308 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TSPY8P0CW00 308 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 LYL1P12980 280 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 MUTP22033 750 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 IL4RP24394 825 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TNFRSF8P28908 595 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 HOXA11P31270 313 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 HSPA4P34932 840 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CTNNA1P35221 906 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SKIV2L2P42285 1042 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CLCNKBP51801 687 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 NAP1L1P55209 391 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 UBXN2AP68543 259 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CBX1P83916 185 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TSPY1Q01534 308 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 PDCLQ13371 301 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRIM29Q14134 588 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SMC1AQ14683 1233 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLCB4Q15147 1175 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SYTL3Q4VX76 610 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 FSCBQ5H9T9 825 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATL3Q6DD88 541 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 FAAH2Q6GMR7 532 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 NCAPH2Q6IBW4 605 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 JMJD6Q6NYC1 403 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SARM1Q6SZW1 724 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 RBM43Q6ZSC3 357 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CATSPER4Q7RTX7 472 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMC8Q8IU68 726 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 HORMAD2Q8N7B1 307 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 NAT8LQ8N9F0 302 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SPATA5Q8NB90 893 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCDC112Q8NEF3 446 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZNF397Q8NF99 534 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CSGALNACT1Q8TDX6 532 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SLC35F5Q8WV83 523 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 GIMAP1Q8WWP7 306 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 THAP4Q8WY91 577 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 NCSTNQ92542 709 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 RUBCNQ92622 972 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 NEUROG1Q92886 237 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 ITFG2Q969R8 447 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 ERO1AQ96HE7 468 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 PPP1R10Q96QC0 940 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CTAGE1Q96RT6 745 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 DESI2Q9BSY9 194 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 SLCO5A1Q9H2Y9 848 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CD93Q9NPY3 652 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 DDX19AQ9NUU7 478 aaKnown RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 HOXC10Q9NYD6 342 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 FBXO40Q9UH90 709 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 CDH22Q9UJ99 828 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 FZD10Q9ULW2 581 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 V9GYY5 206 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 RAD50Q92878 1312 aa3.85□□□□□ -1.79
HMGB3P23-201ENST00000414981 STX6O43752 255 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 AHCYL1O43865 530 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 KRT38O76015 456 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ACAA1P09110 424 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCDC159P0C7I6 412 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 VEGFAP15692 232 aaPredicted RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CHMLP26374 656 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 GJC1P36383 396 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CD86P42081 329 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 GSDMDP57764 484 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARHGAP8P85298 464 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLIN5Q00G26 463 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 NCBP1Q09161 790 aaKnown RBP3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 CUL4BQ13620 913 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 KEAP1Q14145 624 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ANKRD1Q15327 319 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ASIC2Q16515 512 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TIGD6Q17RP2 521 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZNF585BQ52M93 769 aa3.84□□□□□ -1.79
HMGB3P23-201ENST00000414981 TDRD12Q587J7 1177 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms