RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DYTNA2CJ06 578 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 PDE9AO76083 593 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 MYBL2P10244 700 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 BIKQ13323 160 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 LPCAT2Q7L5N7 544 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 LUZP2Q86TE4 346 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 LRRN4CLQ8ND94 238 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TFAP2BQ92481 460 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 AP2M1Q96CW1 435 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TRIT1Q9H3H1 467 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 APOBEC3GQ9HC16 384 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 NOCTQ9UK39 431 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 MFHAS1Q9Y4C4 1052 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 PRKAG1P54619 331 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 OTUD3Q5T2D3 398 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 RHBDF2Q6PJF5 856 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 GPR135Q8IZ08 494 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 DSELQ8IZU8 1212 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 ARNTL2Q8WYA1 636 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 HAPLN3Q96S86 360 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TCF12Q99081 682 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 TTLL2Q9BWV7 592 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 IMP3Q9NV31 184 aaKnown RBP17.29■□□□□ 0.36
PHRF1-202ENST00000413872 COLEC10Q9Y6Z7 277 aa17.29■□□□□ 0.36
PHRF1-202ENST00000413872 A0A1B0GW55 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 CLOCKO15516 846 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 STBD1O95210 358 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 FAM58BPP0C7Q3 252 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4L2P0CJ85 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4L3P0CJ86 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4L4P0CJ87 422 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4L5P0CJ88 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4L6P0CJ89 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4L7P0CJ90 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 ASPAP45381 313 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 RAB30Q15771 203 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 RNF43Q68DV7 783 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 C16orf62Q7Z3J2 963 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 ANKS1BQ7Z6G8 1248 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DUX4Q9UBX2 424 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 NRP1O14786 923 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 IRAK2O43187 625 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 SNX3O60493 162 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 FAM20BO75063 409 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 ERN1O75460 977 aaKnown RBP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 DDX6P26196 483 aaKnown RBP eCLIP17.28■□□□□ 0.361e-7■■□□□ 11.7
PHRF1-202ENST00000413872 ADSSP30520 456 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 TRIM40Q6P9F5 258 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 NTAN1Q96AB6 310 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 SNED1Q8TER0 1413 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 CPSF6Q16630 551 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 INO80DQ53TQ3 878 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 PRSS55Q6UWB4 352 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 TRABD2AQ86V40 505 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 SCLYQ96I15 445 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 MYOCQ99972 504 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 TBCDQ9BTW9 1192 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 SDCBP2Q9H190 292 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 POLMQ9NP87 494 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 A0A0U1RQJ8 604 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 OASLQ15646 514 aaKnown RBP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 ZNF792Q3KQV3 632 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 OTOP3Q7RTS5 596 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 SLC44A1Q8WWI5 657 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 NDRG1Q92597 394 aaKnown RBP17.28■□□□□ 0.36
PHRF1-202ENST00000413872 ZNF780BQ9Y6R6 833 aa17.28■□□□□ 0.36
PHRF1-202ENST00000413872 RGS5O15539 181 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 BANF1O75531 89 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 CCL5P13501 91 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 MYL12AP19105 171 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 BNIP2Q12982 314 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 HECTD2Q5U5R9 776 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 EXOC3L1Q86VI1 746 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 ZNF276Q8N554 614 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 ZBTB2Q8N680 514 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 RMND5BQ96G75 393 aaPredicted RBP17.27■□□□□ 0.36
PHRF1-202ENST00000413872 ADI1Q9BV57 179 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 ABCG4Q9H172 646 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 DNAJC11Q9NVH1 559 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 FZD10Q9ULW2 581 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 COPG1Q9Y678 874 aaKnown RBP17.27■□□□□ 0.36
PHRF1-202ENST00000413872 HIST1H2ABP04908 130 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 EPORP19235 508 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 TALDO1P37837 337 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 GPM6BQ13491 265 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 TYW3Q6IPR3 259 aaKnown RBP17.27■□□□□ 0.36
PHRF1-202ENST00000413872 CDC73Q6P1J9 531 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 HIST3H2AQ7L7L0 130 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 GALNT13Q8IUC8 556 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 CRYBG2Q8N1P7 616 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 DHRSXQ8N5I4 330 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 OR10G6Q8NH81 332 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 HIST1H2ACQ93077 130 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 PTCD3Q96EY7 689 aaKnown RBP17.27■□□□□ 0.36
PHRF1-202ENST00000413872 F2P00734 622 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 VIPP01282 170 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 NTRK1P04629 796 aa17.27■□□□□ 0.36
PHRF1-202ENST00000413872 MRPS15P82914 257 aaKnown RBP17.27■□□□□ 0.36
PHRF1-202ENST00000413872 GRSF1Q12849 480 aaKnown RBP eCLIP17.27■□□□□ 0.363e-14■■■□□ 14.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms