RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 C2CD4CQ8TF44 421 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GDPD5Q8WTR4 605 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC35F5Q8WV83 523 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ELP4Q96EB1 424 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FEM1CQ96JP0 617 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KLHL15Q96M94 604 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMEM68Q96MH6 324 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NR1H4Q96RI1 486 aaPredicted RBP2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 BBS4Q96RK4 519 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MAP7D2Q96T17 732 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SDF4Q9BRK5 362 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TM2D2Q9BX73 214 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C1QTNF1Q9BXJ1 281 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MUC13Q9H3R2 512 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HCFC1R1Q9NWW0 138 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZDHHC7Q9NXF8 308 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MAP3K20Q9NYL2 800 aaKnown RBP2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NCKIPSDQ9NZQ3 722 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KLHL13Q9P2N7 655 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SEL1LQ9UBV2 794 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HAO1Q9UJM8 370 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 VPS28Q9UK41 221 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CRYBG1Q9Y4K1 1723 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZMYM2Q9UBW7 1377 aa2.72□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CYP2D7A0A087X1C5 515 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TCRBV7S3A2A0A539 114 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MYO1GB0I1T2 1018 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TCERG1O14776 1098 aaKnown RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 BCAT2O15382 392 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 INSIG1O15503 277 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SLC25A12O75746 678 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NEURL1O76050 574 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NDUFB4O95168 129 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MT-CYBP00156 380 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 FGBP02675 491 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CTSAP10619 480 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TFPIP10646 304 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 UNGP13051 313 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ATP1A3P13637 1013 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DPEP1P16444 411 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SAT1P21673 171 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 AVPR2P30518 371 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HOXC9P31274 260 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CCKARP32238 428 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CDAP32320 146 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PSMB10P40306 273 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DPP6P42658 865 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CENPAP49450 140 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TUBP50607 506 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LBX1P52954 281 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DRG2P55039 364 aaKnown RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 YPEL5P62699 121 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CYP4A11Q02928 519 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CFHR1Q03591 330 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF91Q05481 1191 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ST3GAL1Q11201 340 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TRAF2Q12933 501 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 OLIG2Q13516 323 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CUL4AQ13619 759 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KLF9Q13886 244 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SIM2Q14190 667 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NEDD9Q14511 834 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 WTAPQ15007 396 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SHBQ15464 509 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TBCEQ15813 527 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RPE65Q16518 533 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PRICKLE4Q2TBC4 344 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MIDNQ504T8 468 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SH2D4BQ5SQS7 431 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 OTUD1Q5VV17 481 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 MORN5Q5VZ52 161 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ZNF626Q68DY1 528 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HEPHL1Q6MZM0 1159 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 NCEH1Q6PIU2 408 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RNF144BQ7Z419 303 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KDELC2Q7Z4H8 507 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TFAP2DQ7Z6R9 452 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 GPAT4Q86UL3 456 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TAGAPQ8N103 731 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ARFGAP1Q8N6T3 406 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 ARL14EPQ8N8R7 260 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CCDC89Q8N998 374 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SCCPDHQ8NBX0 429 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CADM4Q8NFZ8 388 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TMEM163Q8TC26 289 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 DENND1AQ8TEH3 1009 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 RPL36ALQ969Q0 106 aaKnown RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PGAM5Q96HS1 289 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 SIGLEC11Q96RL6 698 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 GFM1Q96RP9 751 aaKnown RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PIMREGQ9BSJ6 248 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 HERC2P3Q9BVR0 1158 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 PHF7Q9BWX1 381 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 TEX13AQ9BXU3 409 aaPredicted RBP2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 LMAN2LQ9H0V9 348 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CDT1Q9H211 546 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 CATSPERBQ9H7T0 1116 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 KAT14Q9H8E8 782 aa2.71□□□□□ -1.98
RNU6-1140P-201ENST00000410517 BPIFA1Q9NP55 256 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms