RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 OR1A2Q9Y585 309 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 RAI2Q9Y5P3 530 aa14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 TDRD6O60522 2096 aaKnown RBP14.56□□□□□ -0.08
NIF3L1-205ENST00000409588 CPED1A4D0V7 1026 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 ZW10O43264 779 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 FZD6O60353 706 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 DXOO77932 396 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 PCCBP05166 539 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 PNLIPP16233 465 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 LSSP48449 732 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 C1orf61Q13536 156 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 MESDQ14696 234 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 CDKN3Q16667 212 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 ATP13A4Q4VNC1 1196 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 ODF2Q5BJF6 829 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 OGFOD3Q6PK18 319 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 IGF2-ASQ6U949 168 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 LRRC69Q6ZNQ3 347 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 EFL1Q7Z2Z2 1120 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 MARCH9Q86YJ5 346 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 PIH1D2Q8WWB5 315 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 TSACCQ96A04 125 aaPredicted RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 FUBP1Q96AE4 644 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 NUS1Q96E22 293 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 CALR3Q96L12 384 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 ZNF578Q96N58 590 aaPredicted RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 SEMA3CQ99985 751 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 TEX101Q9BY14 249 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 NT5MQ9NPB1 228 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 DDX56Q9NY93 547 aaKnown RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 PNMA8BQ9ULN7 279 aaPredicted RBP14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 RAXQ9Y2V3 346 aa14.55□□□□□ -0.08
NIF3L1-205ENST00000409588 PKD1L2Q7Z442 2459 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 TK2O00142 265 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 MYCLP1P12525 358 aaPredicted RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 MLLT3P42568 568 aaPredicted RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 TAS2R40P59535 323 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 ERVPABLB-1P60509 514 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 MAXP61244 160 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 FOXK1P85037 733 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 TRAF2Q12933 501 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 TBX2Q13207 712 aaPredicted RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 CNGA3Q16281 694 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 ISXQ2M1V0 245 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 RBM44Q6ZP01 1051 aaKnown RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 ZNF765Q7L2R6 523 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 RD3Q7Z3Z2 195 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 RHOT1Q8IXI2 618 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 SLC35F3Q8IY50 421 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 CCDC13Q8IYE1 715 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 NRSN1Q8IZ57 195 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 PLA2G15Q8NCC3 412 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 CCNYQ8ND76 341 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 SNIP1Q8TAD8 396 aaKnown RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 DTD2Q96FN9 168 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 NSMCE3Q96MG7 304 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 CHP1Q99653 195 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 PACSIN1Q9BY11 444 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 TCEAL2Q9H3H9 227 aaPredicted RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 POLR1BQ9H9Y6 1135 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 LUC7LQ9NQ29 371 aaKnown RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 TRNAU1APQ9NX07 287 aaKnown RBP14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 GPR34Q9UPC5 381 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 ACACAQ13085 2346 aa14.54□□□□□ -0.08
NIF3L1-205ENST00000409588 ZFHX4Q86UP3 3567 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 URB1O60287 2271 aaKnown RBP14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 A0A0J9YYE9 177 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 RGSL1A5PLK6 1076 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 MFSD11O43934 449 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 TRBC1P01850 177 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 PRKCGP05129 697 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 GM2AP17900 193 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 EIF2S3P41091 472 aaKnown RBP14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 NR2C2P49116 596 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 EPHB1P54762 984 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 HADHBP55084 474 aaKnown RBP14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 SEMG2Q02383 582 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 PPIDQ08752 370 aaKnown RBP14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 PDK1Q15118 436 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 SLC9A4Q6AI14 798 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 GUSBP11Q6P575 273 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 TECPR1Q7Z6L1 1165 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 CCDC170Q8IYT3 715 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 PQLC3Q8N755 202 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 LYSMD1Q96S90 227 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 ADGRE3Q9BY15 652 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 TRIM5Q9C035 493 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 DTLQ9NZJ0 730 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 APPL1Q9UKG1 709 aa14.53□□□□□ -0.08
NIF3L1-205ENST00000409588 FAM208BQ5VWN6 2430 aa14.52□□□□□ -0.08
NIF3L1-205ENST00000409588 TTC24A2A3L6 582 aaPredicted RBP14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 LRRD1A4D1F6 860 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 TMEM202A6NGA9 273 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 A8MX80 341 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 USP12O75317 370 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 CSO75390 466 aaKnown RBP14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 GLB1P16278 677 aa14.52□□□□□ -0.09
NIF3L1-205ENST00000409588 TGM2P21980 687 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms