RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 COL1A2P08123 1366 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 MAGEB16A2A368 324 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 KRT87PA6NCN2 255 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 UPK3BL1B0FP48 263 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 UPK3BL2E5RIL1 263 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 E7ENX8 843 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 UBDO15205 165 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 NCAM2O15394 837 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 MTSS1O43312 755 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 GJB5O95377 273 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 ALDH2P05091 517 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 GSSP48637 474 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 GEMP55040 296 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 CDKL1Q00532 357 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 PLOD1Q02809 727 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 UPP1Q16831 310 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 MTX3Q5HYI7 312 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 PCID2Q5JVF3 399 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 OTUD3Q5T2D3 398 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 RNF180Q86T96 592 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 CLDN19Q8N6F1 224 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 CCT7Q99832 543 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 CINPQ9BW66 212 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 ABCC13Q9NSE7 274 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 GDAP2Q9NXN4 497 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 H3BMM5 538 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 SNX2O60749 519 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 H2AFYO75367 372 aaKnown RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 FAM58BPP0C7Q3 252 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 TAS1R1Q7RTX1 841 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 LINC00523Q86TU6 105 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 AFAP1L2Q8N4X5 818 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 CDYL2Q8N8U2 506 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 ANKRD49Q8WVL7 239 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 VPS33AQ96AX1 596 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 MYEOVQ96EZ4 313 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 TNKS2Q9H2K2 1166 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 TBC1D13Q9NVG8 400 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 SCHIP1Q9P0W5 487 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 EVLQ9UI08 416 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 RNF112Q9ULX5 631 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 PRPF19Q9UMS4 504 aaKnown RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 F5H5T6 163 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 IRAK2O43187 625 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 RNASEH2AO75792 299 aaKnown RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 NCK1P16333 377 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 ALDH7A1P49419 539 aaKnown RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 CDC42EP1Q00587 391 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 PTPRNQ16849 979 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF423Q2M1K9 1284 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 VPS26BQ4G0F5 336 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 UGT2A3Q6UWM9 527 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 ADGRG6Q86SQ4 1221 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 PGAM4Q8N0Y7 254 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 FCF1Q9Y324 198 aaKnown RBP13.4□□□□□ -0.26
COL6A2-204ENST00000409416 PCDHB5Q9Y5E4 795 aa13.4□□□□□ -0.26
COL6A2-204ENST00000409416 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 PSMD12O00232 456 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 HNRNPRO43390 633 aaKnown RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 TIPRLO75663 272 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 CLIC3O95833 236 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 MBL2P11226 248 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ALOX15P16050 662 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 EEF1B2P24534 225 aaKnown RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 AXLP30530 894 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ANGPTL8Q6UXH0 198 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 MFSD6LQ8IWD5 586 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 RNF168Q8IYW5 571 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 DDI1Q8WTU0 396 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ZNF419Q96HQ0 510 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 OLFM1Q99784 485 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 TMEM79Q9BSE2 394 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 TBCDQ9BTW9 1192 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 NOL11Q9H8H0 719 aaKnown RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 LIN28AQ9H9Z2 209 aaKnown RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ZBTB26Q9HCK0 441 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ATP11BQ9Y2G3 1177 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 PRUNE2Q8WUY3 3088 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 MRASO14807 208 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ADAM12O43184 909 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 DUSP11O75319 330 aaKnown RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 GLP2RO95838 553 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ALPIP09923 528 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 CKMT2P17540 419 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 TMED1Q13445 227 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 PIK3R6Q5UE93 754 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 SETD3Q86TU7 594 aaPredicted RBP13.39□□□□□ -0.27
COL6A2-204ENST00000409416 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 LPGAT1Q92604 370 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 SLC2A13Q96QE2 648 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 ZFP14Q9HCL3 533 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 AP4S1Q9Y587 144 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 OR1I1O60431 355 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 SBK3P0C264 359 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 KCNE1P15382 129 aa13.39□□□□□ -0.27
COL6A2-204ENST00000409416 SCNN1AP37088 669 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms