RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 ACTL7AQ9Y615 435 aa16.58■□□□□ 0.25
COL23A1-202ENST00000407622 SNUPNO95149 360 aaKnown RBP16.58■□□□□ 0.24
COL23A1-202ENST00000407622 TFAP2AP05549 437 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 ASGR1P07306 291 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 SNRPB2P08579 225 aaKnown RBP16.58■□□□□ 0.24
COL23A1-202ENST00000407622 SPATA31D3P0C874 917 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 PSMD8P48556 350 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 FOXA1P55317 472 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 SH3BP2P78314 561 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 HTRA3P83110 453 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 STX5Q13190 355 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 GALNT3Q14435 633 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 NRF1Q16656 503 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 UGT3A2Q3SY77 523 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 C6orf10Q5SRN2 563 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 IYDQ6PHW0 289 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 SPATA31D4Q6ZUB0 917 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 FUNDC1Q8IVP5 155 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 TEX26Q8N6G2 289 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 ATAD1Q8NBU5 361 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 OR13C4Q8NGS5 318 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 BLOC1S5Q8TDH9 187 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 TADA1Q96BN2 335 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 LRCH3Q96II8 777 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 SLC45A3Q96JT2 553 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 UROC1Q96N76 676 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 UPF3AQ9H1J1 476 aaKnown RBP16.58■□□□□ 0.24
COL23A1-202ENST00000407622 SARDHQ9UL12 918 aa16.58■□□□□ 0.24
COL23A1-202ENST00000407622 PRG3Q9Y2Y8 225 aaPredicted RBP16.58■□□□□ 0.24
COL23A1-202ENST00000407622 C9JVG2 144 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 MRASO14807 208 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 GOT2P00505 430 aaKnown RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 C8BP07358 591 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 CD1DP15813 335 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 ZNF26P17031 533 aaPredicted RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 CCND3P30281 292 aaPredicted RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 C11orf91Q3C1V1 193 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 MGAT5BQ3V5L5 792 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 RTN4RL1Q86UN2 441 aaPredicted RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 SLC22A9Q8IVM8 553 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 PRICKLE1Q96MT3 831 aaPredicted RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 NSUN5Q96P11 429 aaKnown RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 SEMA3CQ99985 751 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 CD300AQ9UGN4 299 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 VWA8A3KMH1 1905 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 IGLV3-10A0A075B6K4 115 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 LOC285095A0A1B0GVY8 99 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 C7orf72A4D263 438 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 H3BMM5 538 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 PRKAR2AP13861 404 aaKnown RBP16.57■□□□□ 0.24
COL23A1-202ENST00000407622 ATP6V1B1P15313 513 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 FDXRP22570 491 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 NKX3-2P78367 333 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 OR4D1Q15615 310 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 GALNT7Q86SF2 657 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 RETREG3Q86VR2 466 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 AFAP1L2Q8N4X5 818 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 CATSPER1Q8NEC5 780 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 L3HYPDHQ96EM0 354 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 C19orf60Q96EN9 201 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 B3GALT6Q96L58 329 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 FNIP2Q9P278 1114 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 NOD1Q9Y239 953 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 AP4S1Q9Y587 144 aa16.57■□□□□ 0.24
COL23A1-202ENST00000407622 A0A1B0GTL3 188 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 A0A1B0GVG6 124 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 UBXN8O00124 270 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 NRP2O60462 931 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 SLC2A3P11169 496 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 YBX1P67809 324 aaKnown RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 GALNT1Q10472 559 aaPredicted RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 FBXO48Q5FWF7 155 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 CLLU1OSQ5K130 101 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 C8orf82Q6P1X6 216 aaPredicted RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 PTGR2Q8N8N7 351 aaPredicted RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 PIP4K2CQ8TBX8 421 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 NMD3Q96D46 503 aaKnown RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 KCNA7Q96RP8 456 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 Q9H521 79 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 AKTIPQ9H8T0 292 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 SPAG4Q9NPE6 437 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 DNAJC15Q9Y5T4 150 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 CCDC162PA2VCL2 907 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 ADAMTS4O75173 837 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 SLC7A2P52569 658 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 HERVK_113P63132 956 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 RHDQ02161 417 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 POLD3Q15054 466 aaPredicted RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 MAPRE2Q15555 327 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 KCNA10Q16322 511 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 EME1Q96AY2 570 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 RPRD1AQ96P16 312 aaPredicted RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 ERVK-6Q9BXR3 956 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 GRIP2Q9C0E4 1043 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 COQ10BQ9H8M1 238 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 SPC25Q9HBM1 224 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL23A1-202ENST00000407622 TMEM181Q9P2C4 612 aa16.56■□□□□ 0.24
COL23A1-202ENST00000407622 EPS15L1Q9UBC2 864 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms