RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 AHCYL1O43865 530 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 SCN2BO60939 215 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PEX11AO75192 247 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 SERPINA6P08185 405 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 TMPRSS11AQ6ZMR5 421 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PIWIL4Q7Z3Z4 852 aaKnown RBP12.06□□□□□ -0.48
SMCR8-201ENST00000406438 GPR135Q8IZ08 494 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 MEIOBQ8N635 442 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 KBTBD7Q8WVZ9 684 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 MNTQ99583 582 aa12.06□□□□□ -0.48
SMCR8-201ENST00000406438 PTPRMP28827 1452 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 LMTK2Q8IWU2 1503 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PTPRNQ16849 979 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 NPNTQ6UXI9 565 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TCAIMQ8N3R3 496 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PSMA8Q8TAA3 256 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 AARSD1Q9BTE6 412 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TNKS2Q9H2K2 1166 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 GPN1Q9HCN4 374 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PCYOX1Q9UHG3 505 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TOP3BO95985 862 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PDHA2P29803 388 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 RFX5P48382 616 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SUZ12Q15022 739 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 NAIF1Q69YI7 327 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 KBTBD2Q8IY47 623 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 GGA2Q9UJY4 613 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PTPRUQ92729 1446 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3DA0A087WVF3 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3IA0A087WXS9 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3EA0A087X179 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3KA0A087X1G2 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3FA6NER0 549 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3LB9A6J9 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 ERAL1O75616 437 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 FGF1P05230 155 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3HP0C7X1 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3GQ6DHY5 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3CQ6IPX1 549 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 CXCL17Q6UXB2 119 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 MAP4K3Q8IVH8 894 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TBC1D3Q8IZP1 549 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 POC5Q8NA72 575 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PIK3C3Q8NEB9 887 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 EFHD2Q96C19 240 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 WDR12Q9GZL7 423 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SGK2Q9HBY8 427 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SEC14L3Q9UDX4 400 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SAMD4AQ9UPU9 718 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 DHRS7Q9Y394 339 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 FAM205AQ6ZU69 1335 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PGK1P00558 417 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SMIM10L2AP0DMW4 78 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SMIM10L2BP0DMW5 78 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 NR2F6P10588 404 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 COX4I1P13073 169 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 ALDH3A2P51648 485 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SEC23AQ15436 765 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 CPTPQ5TA50 214 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 FAM91A1Q658Y4 838 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 ATG14Q6ZNE5 492 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 GPR180Q86V85 440 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 CPA6Q8N4T0 437 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 AP2M1Q96CW1 435 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 GMIPQ9P107 970 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 KIAA1522Q9P206 1035 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 PCDHGA3Q9Y5H0 932 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 MATN4O95460 622 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 FGBP02675 491 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 OR52K2Q8NGK3 314 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 LOC110117498-PIK3R3F6TDL0 507 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 ZNF208O43345 1280 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 TRIM3O75382 744 aaPredicted RBP12.05□□□□□ -0.48
SMCR8-201ENST00000406438 FAM153BP0C7A2 387 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SLC7A2P52569 658 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 FAM153CQ494X1 144 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 ANKRD52Q8NB46 1076 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 AIF1LQ9BQI0 150 aa12.05□□□□□ -0.48
SMCR8-201ENST00000406438 SLC22A3O75751 556 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 S100A6P06703 90 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 ATP6V0D1P61421 351 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SMARCB1Q12824 385 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 TBX2Q13207 712 aaPredicted RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 PLEKHA1Q9HB21 404 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 NEDD8-MDP1E9PL57 170 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 SP100P23497 879 aaPredicted RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 UBAP2LQ14157 1087 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 LARS2Q15031 903 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 TMPRSS11BQ86T26 416 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 C17orf64Q86WR6 236 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 RIOX2Q8IUF8 465 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 METTL21AQ8WXB1 218 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 TRIM39Q9HCM9 518 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 EQTNQ9NQ60 294 aa12.04□□□□□ -0.48
SMCR8-201ENST00000406438 AGO1Q9UL18 857 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
SMCR8-201ENST00000406438 CDC25CP30307 473 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms