RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ATP6AP2A0A1C7CYW4 349 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 NME4O00746 187 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 ATP6AP2O75787 350 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 CDK14O94921 469 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 SIX3O95343 332 aaPredicted RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 MT-CO1P00395 513 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 CAPN3P20807 821 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 GRK4P32298 578 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 NDST2P52849 883 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 DSC1Q08554 894 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 IKBKEQ14164 716 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 FASTKQ14296 549 aaKnown RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 GRB7Q14451 532 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 NUP93Q8N1F7 819 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TOP1MTQ969P6 601 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 HDAC10Q969S8 669 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 VWA7Q9Y334 891 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TRAF6Q9Y4K3 522 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 COMMD3-BMI1R4GMX3 469 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 FAM155AB1AL88 458 aaPredicted RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 PSMD12O00232 456 aaPredicted RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 SLC7A4O43246 635 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 FGFR3P22607 806 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 HERVK_113P63132 956 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 CTBSQ01459 385 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 PDAP1Q13442 181 aaKnown RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 CLLU1OSQ5K130 101 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 IRAK1BP1Q5VVH5 260 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 KANK2Q63ZY3 851 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TEX37Q96LM6 180 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 ZBED2Q9BTP6 218 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 ERVK-6Q9BXR3 956 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TRIM4Q9C037 500 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 AP5M1Q9H0R1 490 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 AKTIPQ9H8T0 292 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 OLAHQ9NV23 265 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 PLK2Q9NYY3 685 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 FNIP2Q9P278 1114 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 DRGXA6NNA5 263 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 SOCS2O14508 198 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TXNDC9O14530 226 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 CSPG5O95196 566 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 PRR35P0CG20 571 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TYMPP19971 482 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 RPL10P27635 214 aaKnown RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 ACVRL1P37023 503 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 ATP4BP51164 291 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 FKBP1BP68106 108 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 MBTPS1Q14703 1052 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 DDR2Q16832 855 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 AGKQ53H12 422 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 NHSL2Q5HYW2 709 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 RARS2Q5T160 578 aaKnown RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 ALG1LQ6GMV1 187 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 FBXL22Q6P050 247 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 RBM44Q6ZP01 1051 aaKnown RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 SPATA24Q86W54 205 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 GPR150Q8NGU9 434 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 TRIB2Q92519 343 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 SMIM14Q96QK8 99 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 MTG1Q9BT17 334 aaPredicted RBP9.86□□□□□ -0.83
MSH2-202ENST00000406134 GMIPQ9P107 970 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 GALPQ9UBC7 116 aa9.86□□□□□ -0.83
MSH2-202ENST00000406134 SMIM31A0A1B0GVY4 71 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 UBDO15205 165 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 ZNF37AP17032 561 aaPredicted RBP9.85□□□□□ -0.83
MSH2-202ENST00000406134 ART3Q13508 389 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 NRF1Q16656 503 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 FAM83EQ2M2I3 478 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 SLC5A9Q2M3M2 681 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 RASAL3Q86YV0 1011 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 ARHGAP18Q8N392 663 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 GALNT4Q8N4A0 578 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 GPR152Q8TDT2 470 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 C19orf60Q96EN9 201 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 TBATAQ96M53 351 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 UXTQ9UBK9 157 aaPredicted RBP9.85□□□□□ -0.83
MSH2-202ENST00000406134 PCDHB8Q9UN66 801 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 CEPT1Q9Y6K0 416 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 SOAT2O75908 522 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 GOT2P00505 430 aaKnown RBP9.85□□□□□ -0.83
MSH2-202ENST00000406134 AKR1A1P14550 325 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 RHOQP17081 205 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 CHRM3P20309 590 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 GRIK1P39086 918 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 TRAP1Q12931 704 aaKnown RBP9.85□□□□□ -0.83
MSH2-202ENST00000406134 TYSND1Q2T9J0 566 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 RASIP1Q5U651 963 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 AGAP9Q5VTM2 703 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 OR13C4Q8NGS5 318 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 DNAJC1Q96KC8 554 aaKnown RBP9.85□□□□□ -0.83
MSH2-202ENST00000406134 LRGUKQ96M69 825 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 SLC30A3Q99726 388 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 MRPS26Q9BYN8 205 aaKnown RBP9.85□□□□□ -0.83
MSH2-202ENST00000406134 TRIM8Q9BZR9 551 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 GRIP2Q9C0E4 1043 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 ETAA1Q9NY74 926 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 DSEQ9UL01 958 aa9.85□□□□□ -0.83
MSH2-202ENST00000406134 CRYL1Q9Y2S2 319 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms