RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 C11orf65Q8NCR3 313 aa5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 SLC25A28Q96A46 364 aa5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 PIP5K1AQ99755 562 aa5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 SLC29A3Q9BZD2 475 aa5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 KLHL31Q9H511 634 aa5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 LAS1LQ9Y4W2 734 aaKnown RBP5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 TTC3P53804 2025 aa5.19□□□□□ -1.58
HMGB3P19-201ENST00000403971 MYH14Q7Z406 1995 aaKnown RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 KCPQ6ZWJ8 1503 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 COL5A3P25940 1745 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 LY6G6EA0A0G2JKS1 128 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 HSPB2A8KAH6 182 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 H0YGN5 161 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 ATP2C2O75185 946 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 HEXAP06865 529 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 RYKP34925 604 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 GPR12P47775 334 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 RARSP54136 660 aaKnown RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 CDH12P55289 794 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 SELENOVP59797 346 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 PTGR1Q14914 329 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 VEPH1Q14D04 833 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 HSPB2Q16082 182 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 TWISTNBQ3B726 338 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 Q5PR19 223 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 WASHC2DQ5SRD0 308 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 HEPHL1Q6MZM0 1159 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 CES5AQ6NT32 575 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 C11orf87Q6NUJ2 197 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 CPLX4Q7Z7G2 160 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 MRPL10Q7Z7H8 261 aaKnown RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 TBC1D26Q86UD7 250 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 TDRPQ86YL5 185 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 CAMK1DQ8IU85 385 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 DHX40Q8IX18 779 aaKnown RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 CADM4Q8NFZ8 388 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 MPLKIPQ8TAP9 179 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 SAAL1Q96ER3 474 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 PERPQ96FX8 193 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 NPFFR1Q9GZQ6 430 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 PDCL3Q9H2J4 239 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 TASP1Q9H6P5 420 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 BRF2Q9HAW0 419 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 FZD3Q9NPG1 666 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 SIRT3Q9NTG7 399 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 TMOD3Q9NYL9 352 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 PIAS3Q9Y6X2 628 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 RGPD3A6NKT7 1758 aaPredicted RBP5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 RGPD4Q7Z3J3 1758 aa5.18□□□□□ -1.58
HMGB3P19-201ENST00000403971 TJP1Q07157 1748 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 A0A087X0M5 115 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 IGLV5-39A0A0G2JS06 123 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 A0A1B0GX30 115 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 TYW5A2RUC4 315 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 EBAG9O00559 213 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 KIF1CO43896 1103 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 USO1O60763 962 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 BAIAP3O94812 1187 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 TMEM63AO94886 807 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 SRD5A1P18405 259 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 ZNF81P51508 661 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 RPS3AP61247 264 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 DCAF7P61962 342 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 PPATQ06203 517 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 GRIK3Q13003 919 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 DUSP6Q16828 381 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 PRTGQ2VWP7 1150 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 TXNDC8Q6A555 127 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 PARM1Q6UWI2 310 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 COLCA1Q6ZS62 124 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 TMTC3Q6ZXV5 915 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 SLC46A3Q7Z3Q1 461 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 NOXA1Q86UR1 476 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 TTC5Q8N0Z6 440 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 MCPH1Q8NEM0 835 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 PIGBQ92521 554 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 TMEM18Q96B42 140 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 RNF183Q96D59 192 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 PABPC5Q96DU9 382 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 ZNF333Q96JL9 665 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 NLRP4Q96MN2 994 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 KRTAP4-5Q9BYR2 181 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 ISCUQ9H1K1 167 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 RANBP17Q9H2T7 1088 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 SPATS2LQ9NUQ6 558 aaKnown RBP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 MIS18AQ9NYP9 233 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 MKLN1Q9UL63 735 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 CAPN7Q9Y6W3 813 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 RREB1Q92766 1687 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 KIF16BQ96L93 1317 aa5.17□□□□□ -1.58
HMGB3P19-201ENST00000403971 NUP98P52948 1817 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 PGPEP1LA6NFU8 196 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 KLRF2D3W0D1 207 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 I6L893 689 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 OVOL3O00110 214 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 SOCS2O14508 198 aa5.16□□□□□ -1.58
HMGB3P19-201ENST00000403971 MOSPD3O75425 235 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms