RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 GKN1Q9NS71 199 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 ADAMTS6Q9UKP5 1117 aa16.96■□□□□ 0.31
DNMT3A-205ENST00000402667 CLDN11O75508 207 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 SUPT7LO94864 414 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 EFEMP2O95967 443 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 PRSS56P0CW18 603 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 ARSAP15289 507 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 HMGA1P17096 107 aaKnown RBP16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 SUOXP51687 545 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 STC1P52823 247 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 USP41Q3LFD5 358 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 KLHDC10Q6PID8 442 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 PGAM4Q8N0Y7 254 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 LRRC43Q8N309 656 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 RYBPQ8N488 228 aaPredicted RBP16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 SLAIN1Q8ND83 568 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 OVCA2Q8WZ82 227 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 TRMOQ9BU70 441 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 POLR3BQ9NW08 1133 aaPredicted RBP16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 VPS28Q9UK41 221 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 TRAF6Q9Y4K3 522 aa16.96■□□□□ 0.3
DNMT3A-205ENST00000402667 INSIG1O15503 277 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 CFLARO15519 480 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 STC2O76061 302 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 SEC24AO95486 1093 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 CRTAMO95727 393 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 HSPA1AP0DMV8 641 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 HSPA1BP0DMV9 641 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ENO3P13929 434 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 TSPAN8P19075 237 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 CR2P20023 1033 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 PMLP29590 882 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 CORO1AP31146 461 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ALDH7A1P49419 539 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ZNF140P52738 457 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 THOP1P52888 689 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 NFKB2Q00653 900 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 CDC16Q13042 620 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ART3Q13508 389 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ZNF423Q2M1K9 1284 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 TYSND1Q2T9J0 566 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 DEFB115Q30KQ5 88 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 EML3Q32P44 896 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 UNC50Q53HI1 259 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 PIGGQ5H8A4 983 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 RMDN1Q96DB5 314 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 VN1R3Q9BXE9 311 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 WDR41Q9HAD4 459 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 NLE1Q9NVX2 485 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ILVBLA1L0T0 632 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 H3BNX3 289 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 SMIM24O75264 130 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 GNRH1P01148 92 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 RHOCP08134 193 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 RAG1P15918 1043 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 ZNF37AP17032 561 aaPredicted RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 DPP6P42658 865 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 INHBCP55103 352 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 CYTH1Q15438 398 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 PPP1R3AQ16821 1122 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 NPAS2Q99743 824 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 AARSD1Q9BTE6 412 aaKnown RBP16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 POPDC3Q9HBV1 291 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 BACE2Q9Y5Z0 518 aa16.95■□□□□ 0.3
DNMT3A-205ENST00000402667 SCN5AQ14524 2016 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 CCDC189A1A4V9 331 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 PRLP01236 227 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 HERVK_113P63132 956 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 ZNF177Q13360 481 aaPredicted RBP16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 FAM219BQ5XKK7 198 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 CLEC6AQ6EIG7 209 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 GK5Q6ZS86 529 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 MDGA1Q8NFP4 955 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 HMGCLL1Q8TB92 370 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 EXT2Q93063 718 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 ERVK-6Q9BXR3 956 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 SEZ6LQ9BYH1 1024 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 SCUBE2Q9NQ36 999 aa16.94■□□□□ 0.3
DNMT3A-205ENST00000402667 CBX4O00257 560 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 UBDO15205 165 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 TSPAN3O60637 253 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 PQBP1O60828 265 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 UPP2O95045 317 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 PKNOX1P55347 436 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 PDAP1Q13442 181 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 CEACAM7Q14002 265 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 RFTN1Q14699 578 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 OR4D1Q15615 310 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 LPCAT4Q643R3 524 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 TMEM154Q6P9G4 183 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 GLT6D1Q7Z4J2 308 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 OR4K2Q8NGD2 314 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 USP13Q92995 863 aaPredicted RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 SMIM14Q96QK8 99 aa16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 TDRD1Q9BXT4 1180 aaKnown RBP16.93■□□□□ 0.3
DNMT3A-205ENST00000402667 RNF38Q9H0F5 515 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms