RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ANKRD49Q8WVL7 239 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 CCDC106Q9BWC9 280 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 CDH19Q9H159 772 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 ABCB8Q9NUT2 735 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 INTS6Q9UL03 887 aaKnown RBP12.28□□□□□ -0.44
CLIP4-203ENST00000401617 RAP2CQ9Y3L5 183 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
CLIP4-203ENST00000401617 SCN8AQ9UQD0 1980 aa12.27□□□□□ -0.44
CLIP4-203ENST00000401617 LINC01553A4QN01 128 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 K7ERQ8 282 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 HTRA2O43464 458 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 SMAD6O43541 496 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 ZNF821O75541 412 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 HSPA4LO95757 839 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 RBP1P09455 135 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 CCDC166P0CW27 439 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 PTPN2P17706 415 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 EN2P19622 333 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 ATP5F1P24539 256 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 HNRNPH1P31943 449 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 SLC8A1P32418 973 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 RPL26P61254 145 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 SLC20A2Q08357 652 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 ASPHQ12797 758 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 CAMK1Q14012 370 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 CSHL1Q14406 222 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 PLEKHG6Q3KR16 790 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 ATXN7L2Q5T6C5 722 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 GPR158Q5T848 1215 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 CMTM8Q8IZV2 173 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 LSMEM2Q8N112 164 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 TXNDC5Q8NBS9 432 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 RIN3Q8TB24 985 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 SH3RF2Q8TEC5 729 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 PIH1D2Q8WWB5 315 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 USP13Q92995 863 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 TCEAL4Q96EI5 215 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 C19orf43Q9BQ61 176 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 AARSD1Q9BTE6 412 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 ILKAPQ9H0C8 392 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 GPAMQ9HCL2 828 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 RPL26L1Q9UNX3 145 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 CRYL1Q9Y2S2 319 aa12.27□□□□□ -0.45
CLIP4-203ENST00000401617 ZNF106Q9H2Y7 1883 aaKnown RBP12.27□□□□□ -0.45
CLIP4-203ENST00000401617 NPHS1O60500 1241 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 SNUPNO95149 360 aaKnown RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 PGLSO95336 258 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 CALB2P22676 271 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 CD70P32970 193 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 NAGLUP54802 743 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 TBCCQ15814 346 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 EPGNQ6UW88 154 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 TREML1Q86YW5 311 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 LPGAT1Q92604 370 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 BHMTQ93088 406 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 RAB3IPQ96QF0 476 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 MAGEE1Q9HCI5 957 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 PLK2Q9NYY3 685 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 CCL26Q9Y258 94 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 MATN2O00339 956 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 RFPL2O75678 378 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 PENKP01210 267 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 SERPINB5P36952 375 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 ABL2P42684 1182 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 MAPK8P45983 427 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 ARL13AQ5H913 290 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 TPGS1Q6ZTW0 290 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 ISCA2Q86U28 154 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 VOPP1Q96AW1 172 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 CCDC126Q96EE4 140 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 C17orf80Q9BSJ5 609 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 TBC1D10AQ9BXI6 508 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 SMG9Q9H0W8 520 aaKnown RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 MAN1C1Q9NR34 630 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 POLR3BQ9NW08 1133 aaPredicted RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 IL17CQ9P0M4 197 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 APOBEC2Q9Y235 224 aaKnown RBP12.26□□□□□ -0.45
CLIP4-203ENST00000401617 PCDHB9Q9Y5E1 797 aa12.26□□□□□ -0.45
CLIP4-203ENST00000401617 SOCS5O75159 536 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 CYBBP04839 570 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 CHRNGP07510 517 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 RHOP08100 348 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 HNRNPA1P09651 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLIP4-203ENST00000401617 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 TCF3P15923 654 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 CD9P21926 228 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 USP4Q13107 963 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 PRKAA1Q13131 559 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 PEX6Q13608 980 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 TEAD2Q15562 447 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 ARMC12Q5T9G4 340 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 KLC3Q6P597 504 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 PIWIL4Q7Z3Z4 852 aaKnown RBP12.25□□□□□ -0.45
CLIP4-203ENST00000401617 SPNS2Q8IVW8 549 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 LEMD2Q8NC56 503 aa12.25□□□□□ -0.45
CLIP4-203ENST00000401617 ISG20Q96AZ6 181 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms