RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 CELF2O95319 508 aaKnown RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 ADORA2BP29275 332 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 AP3M2P53677 418 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 CCNA1P78396 465 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 INAVAQ3KP66 663 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 VASH1Q7L8A9 365 aaPredicted RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 HMGCLL1Q8TB92 370 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SPPL2BQ8TCT7 592 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 DPP3Q9NY33 737 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 PTGDR2Q9Y5Y4 395 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 GLTPD2A6NH11 291 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 ANGPT2O15123 496 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 DLGAP3O95886 979 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 CAPNS1P04632 268 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SBK3P0C264 359 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 RPS3AP61247 264 aaKnown RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 C4orf22Q6V702 233 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 CATSPER4Q7RTX7 472 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SFRP1Q8N474 314 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 RYBPQ8N488 228 aaPredicted RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 ANKRD52Q8NB46 1076 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SDCCAG3Q96C92 435 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 OLFM1Q99784 485 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SLC25A23Q9BV35 468 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SLC30A1Q9Y6M5 507 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 NME4O00746 187 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 DGCR6Q14129 220 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 OXA1LQ15070 435 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 BCL2A1Q16548 175 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 CCL14Q16627 93 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 BROXQ5VW32 411 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 ADCK1Q86TW2 530 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 MRPL45Q9BRJ2 306 aaKnown RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 NXF3Q9H4D5 531 aaKnown RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 ZNF385DQ9H6B1 395 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 MTRRQ9UBK8 725 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 SUN2Q9UH99 717 aa17.11■□□□□ 0.33
PTPRA-205ENST00000399903 PNMA8BQ9ULN7 279 aaPredicted RBP17.11■□□□□ 0.33
PTPRA-205ENST00000399903 TRIP11Q15643 1979 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 FAM47E-STBD1D6RA91 191 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 PARNO95453 639 aaKnown RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 CHEK2O96017 543 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 IGFBP6P24592 240 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 RABGGTBP53611 331 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 PLA2G16P53816 162 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 CDH13P55290 713 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 TRAP1Q12931 704 aaKnown RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 PPP1R26Q5T8A7 1209 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 TMEM236Q5W0B7 351 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 STK32CQ86UX6 486 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 FTHL17Q9BXU8 183 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 PCDHGA3Q9Y5H0 932 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 FAM155AB1AL88 458 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 HUS1O60921 280 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 NADKO95544 446 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 SQLEQ14534 574 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 CCNYL2Q5T2Q4 361 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 CCDC81Q6ZN84 652 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 TAS2R42Q7RTR8 314 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 ZNF347Q96SE7 839 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 CCM2LQ9NUG4 571 aaPredicted RBP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTPRA-205ENST00000399903 ADAM28Q9UKQ2 775 aa17.1■□□□□ 0.33
PTPRA-205ENST00000399903 GAS2O43903 313 aaKnown RBP17.09■□□□□ 0.33
PTPRA-205ENST00000399903 CILPO75339 1184 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 VDRP11473 427 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 MLNP12872 115 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 FRA10AC1Q70Z53 315 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 R3HCC1LQ7Z5L2 792 aaKnown RBP17.09■□□□□ 0.33
PTPRA-205ENST00000399903 RETREG3Q86VR2 466 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 PPTC7Q8NI37 304 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 RAB2BQ8WUD1 216 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 DNAJB3Q8WWF6 145 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 ELMO1Q92556 727 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 FUNDC2Q9BWH2 189 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 TRIM15Q9C019 465 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 GJD2Q9UKL4 321 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 BAG5Q9UL15 447 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 ERVK-11Q9UQG0 969 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 BCAS1O75363 584 aaPredicted RBP17.09■□□□□ 0.33
PTPRA-205ENST00000399903 SUPT7LO94864 414 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 MMP3P08254 477 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 CYP2B6P20813 491 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 ADSLP30566 484 aaPredicted RBP17.09■□□□□ 0.33
PTPRA-205ENST00000399903 SLC26A2P50443 739 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 BCAT1P54687 386 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 IFITM3Q01628 133 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 IL1RL1Q01638 556 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 AQP6Q13520 282 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 SLC12A1Q13621 1099 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 POU6F1Q14863 301 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 SURF1Q15526 300 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 CYBRD1Q53TN4 286 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 AFAP1L2Q8N4X5 818 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 OR13F1Q8NGS4 319 aa17.09■□□□□ 0.33
PTPRA-205ENST00000399903 HDAC11Q96DB2 347 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms