RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 STBD1O95210 358 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 LCA5LO95447 670 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RPN2P04844 631 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 C2P06681 752 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ELFN1P0C7U0 828 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SLC6A2P23975 617 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 AQP1P29972 269 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CRHR1P34998 444 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PBX3P40426 434 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 THOP1P52888 689 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NRLP54845 237 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 GRIK3Q13003 919 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MAD2L1Q13257 205 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 DUSP28Q4G0W2 176 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CEP78Q5JTW2 689 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 WASHC2DQ5SRD0 308 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 VWA5B1Q5TIE3 1220 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NAIF1Q69YI7 327 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 BBS12Q6ZW61 710 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 DAW1Q8N136 415 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SLC4A11Q8NBS3 891 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 UXS1Q8NBZ7 420 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 BPIFB6Q8NFQ5 453 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CLHC1Q8NHS4 586 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 VPS33AQ96AX1 596 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NXNL1Q96CM4 212 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NDEL1Q9GZM8 345 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TNKS2Q9H2K2 1166 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RIBC2Q9H4K1 309 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 EPS8L2Q9H6S3 715 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 REEP1Q9H902 201 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NDOR1Q9UHB4 597 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FBXO5Q9UKT4 447 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FBXL21Q9UKT6 434 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SLC12A4Q9UP95 1085 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 GIT1Q9Y2X7 761 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 GPSM3Q9Y4H4 160 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TRAF6Q9Y4K3 522 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SNED1Q8TER0 1413 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 COL1A2P08123 1366 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SOWAHBA6NEL2 793 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TSPAN1O60635 241 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FAM20BO75063 409 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 XYLBO75191 536 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 KRT36O76013 467 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MT-ND1P03886 318 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TNNI3P19429 210 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PAX7P23759 505 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 KRT20P35900 424 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PIK3CGP48736 1102 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CCR4P51679 360 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 WNT3AP56704 352 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SMAD3P84022 425 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 NRG1Q02297 640 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 ATP1A4Q13733 1029 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TRIM25Q14258 630 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 PLA2G4EQ3MJ16 856 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 DGKKQ5KSL6 1271 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ESRP1Q6NXG1 681 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 LCLAT1Q6UWP7 414 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 GALNT5Q7Z7M9 940 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 AMIGO2Q86SJ2 522 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 FAM35AQ86V20 835 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TRABD2AQ86V40 505 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CLVS1Q8IUQ0 354 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 MPP5Q8N3R9 675 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ZNF276Q8N554 614 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 DHRSXQ8N5I4 330 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ATAD1Q8NBU5 361 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SLC44A1Q8WWI5 657 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 PROX1Q92786 737 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 UPF1Q92900 1129 aaKnown RBP eCLIP3.26□□□□□ -1.893e-27■■■■■ 37.1
KNL1-202ENST00000399668 RCN3Q96D15 328 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 HMCESQ96FZ2 354 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 KCTD15Q96SI1 283 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 SIKE1Q9BRV8 207 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SPRTNQ9H040 489 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 CERS4Q9HA82 394 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RABGEF1Q9UJ41 708 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ENTPD4Q9Y227 616 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SLC9A8Q9Y2E8 581 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 MYRFQ9Y2G1 1151 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TSC22D4Q9Y3Q8 395 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ATXN2Q99700 1313 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 COL1A1P02452 1464 aaPredicted RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 IQCMA0A1B0GVH7 501 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RFXANKO14593 260 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 ADCY6O43306 1168 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SGTAO43765 313 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 UGT1A9O60656 530 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 NUDT17P0C025 328 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 CYP4B1P13584 511 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 DGKAP23743 735 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 HOXD13P35453 343 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 RTP1P59025 263 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 LSM3P62310 102 aaKnown RBP3.26□□□□□ -1.89
KNL1-202ENST00000399668 CSNK2BP67870 215 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 TGM3Q08188 693 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 STX4Q12846 297 aa3.26□□□□□ -1.89
KNL1-202ENST00000399668 SFSWAPQ12872 951 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms