RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 CLUHO75153 1309 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 RHPN2P1A8MT19 583 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 MRPS5P82675 430 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ATP1A4Q13733 1029 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 LPIN1Q14693 890 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ADRM1Q16186 407 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 NRF1Q16656 503 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 KLHL24Q6TFL4 600 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 GCNT7Q6ZNI0 430 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SVOPQ8N4V2 548 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ANXA6P08133 673 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ME2P23368 584 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 IDH2P48735 452 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 RPL38P63173 70 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 CYP4F2P78329 520 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 FOXM1Q08050 763 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 PTPRNQ16849 979 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC44A4Q53GD3 710 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ZDHHC13Q8IUH4 622 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 LEMD2Q8NC56 503 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 TIFAQ96CG3 184 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 HHIPL1Q96JK4 782 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 NRDE2Q9H7Z3 1164 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 CIDEBQ9UHD4 219 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 VIPP01282 170 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ZNF37AP17032 561 aaPredicted RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ALOX12P18054 663 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 KELP23276 732 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 RXRGP48443 463 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 KLHL17Q6TDP4 642 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 APTXQ7Z2E3 356 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 TERB1Q8NA31 727 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 EPS8L1Q8TE68 723 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 RORBQ92753 470 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ATAD3AQ9NVI7 634 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SNED1Q8TER0 1413 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 F2P00734 622 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 KRR1Q13601 381 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 DGCR6Q14129 220 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SF1Q15637 639 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SNX30Q5VWJ9 437 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC25A24Q6NUK1 477 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 FAM129CQ86XR2 697 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ARMC8Q8IUR7 673 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 UBASH3BQ8TF42 649 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 UBE2E3Q969T4 207 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 MYO19Q96H55 970 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 SIRPGQ9P1W8 387 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 MAGEC1O60732 1142 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ATP4AP20648 1035 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ITPKBP27987 946 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 AKT2P31751 481 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 NKAPQ8N5F7 415 aaKnown RBP14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ANKLE1Q8NAG6 615 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 LMLNQ96KR4 655 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 ASB2Q96Q27 587 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 LGMNQ99538 433 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 DPEP2Q9H4A9 486 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 PRDM16Q9HAZ2 1276 aa14.26□□□□□ -0.13
PCDHA11-201ENST00000398640 FGF18O76093 207 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 NR2F1P10589 423 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 TTPAP49638 278 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 MRPS22P82650 360 aaKnown RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 GAD2Q05329 585 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 TAF5Q15542 800 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 KLHL35Q6PF15 583 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 CDYL2Q8N8U2 506 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 OR52K2Q8NGK3 314 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 DNAJB14Q8TBM8 379 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 KCTD4Q8WVF5 259 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 HERVK_113Q902F9 699 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 NDRG1Q92597 394 aaKnown RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 CENPIQ92674 756 aaPredicted RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 DAPK2Q9UIK4 370 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 GMEB2Q9UKD1 530 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 ASB3Q9Y575 518 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 SLC38A8A6NNN8 435 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 KPNA5O15131 536 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 CHADO15335 359 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 BCL10O95999 233 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 TFEBP19484 476 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 MC4RP32245 332 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 CDK7P50613 346 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 NAB1Q13506 487 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 IRF5Q13568 498 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 FAM171BQ6P995 826 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 TSEN2Q8NCE0 465 aaKnown RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 OR52L1Q8NGH7 329 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 RMND5BQ96G75 393 aaPredicted RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 GDF3Q9NR23 364 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 OSER1Q9NX31 292 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 ATXN2Q99700 1313 aaKnown RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 EFCAB10A6NFE3 127 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 RFWD3Q6PCD5 774 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 ATP6V1C2Q8NEY4 427 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 LNX1Q8TBB1 728 aaPredicted RBP14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 ATL1Q8WXF7 558 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 AUTS2Q8WXX7 1259 aa14.25□□□□□ -0.13
PCDHA11-201ENST00000398640 TEKT5Q96M29 485 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms