RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 POLR1BQ9H9Y6 1135 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 SIAEQ9HAT2 523 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 CHST12Q9NRB3 414 aa16.02■□□□□ 0.16
CHMP1A-201ENST00000397901 RALGAPA2Q2PPJ7 1873 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 ANKRD34BA5PLL1 514 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 DFFAO00273 331 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 MGEA5O60502 916 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 RSL1D1O76021 490 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 SLC1A2P43004 574 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 PLK1P53350 603 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 GJA9P57773 515 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 SV2CQ496J9 727 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 REP15Q6BDI9 236 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 PKN3Q6P5Z2 889 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 ZC3H7AQ8IWR0 971 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 IQCF2Q8IXL9 164 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 MAELQ96JY0 434 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 SLC9A7Q96T83 725 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 DNAI2Q9GZS0 605 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 NAA50Q9GZZ1 169 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 CACNA2D2Q9NY47 1150 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 OR12D3Q9UGF7 316 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 RAD54BQ9Y620 910 aa16.02■□□□□ 0.15
CHMP1A-201ENST00000397901 PRORSD1PA6NEY8 169 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 LRIG2O94898 1065 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 MMP3P08254 477 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 DAOAP59103 153 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 RHDQ02161 417 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 SCAPQ12770 1279 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 FASTKQ14296 549 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 CSHL1Q14406 222 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 DUSP28Q4G0W2 176 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 FAM117BQ6P1L5 589 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 HERC6Q8IVU3 1022 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 COLGALT2Q8IYK4 626 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 PELI3Q8N2H9 469 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 SPPL2BQ8TCT7 592 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 TOP1MTQ969P6 601 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 SLCO4A1Q96BD0 722 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 UHRF1Q96T88 793 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 TUBA1CQ9BQE3 449 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 TKTL2Q9H0I9 626 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 MRPL40Q9NQ50 206 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 ANKMY1Q9P2S6 941 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 GMPR2Q9P2T1 348 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 SUCOQ9UBS9 1254 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 AURKAO14965 403 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 NPHS1O60500 1241 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 GPR32O75388 356 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 HSPA1AP0DMV8 641 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 HSPA1BP0DMV9 641 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 POLR2EP19388 210 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 KCNA5P22460 613 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 ARNTP27540 789 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 PNPLA4P41247 253 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 TMBIM6P55061 237 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 C1QTNF8P60827 252 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 UGP2Q16851 508 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 PCID2Q5JVF3 399 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 DPP9Q86TI2 863 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 ITIH5Q86UX2 942 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 TMCO5AQ8N6Q1 288 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 CLIP3Q96DZ5 547 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF347Q96SE7 839 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 TBL1YQ9BQ87 522 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 FICDQ9BVA6 458 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 UNC93B1Q9H1C4 597 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 ATXN3LQ9H3M9 355 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 NOL11Q9H8H0 719 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 CARD8Q9Y2G2 431 aa16.01■□□□□ 0.15
CHMP1A-201ENST00000397901 HEATR9A2RTY3 570 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 TNFRSF10AO00220 468 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 WARSP23381 471 aaKnown RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 NME5P56597 212 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF846Q147U1 533 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 PITRM1Q5JRX3 1037 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF470Q6ECI4 717 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 PIWIL4Q7Z3Z4 852 aaKnown RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 LINC00523Q86TU6 105 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 MMAAQ8IVH4 418 aaKnown RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 PNPLA1Q8N8W4 532 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 ATP6V0D2Q8N8Y2 350 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 ANKFN1Q8N957 763 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 OR9I1Q8NGQ6 314 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 PPWD1Q96BP3 646 aaKnown RBP16■□□□□ 0.15
CHMP1A-201ENST00000397901 VAT1Q99536 393 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 SLC39A3Q9BRY0 314 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 EFHD1Q9BUP0 239 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 COLEC11Q9BWP8 271 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 WDCPQ9H6R7 721 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 NANOGQ9H9S0 305 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 POU2F3Q9UKI9 436 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 TSC2P49815 1807 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 ZNF839A8K0R7 811 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 UBDO15205 165 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 SLC7A1P30825 629 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 SLC12A2P55011 1212 aa16■□□□□ 0.15
CHMP1A-201ENST00000397901 STX5Q13190 355 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms