RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 LCA5Q86VQ0 697 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 CHPFQ8IZ52 775 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 OR6P1Q8NGX9 317 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 HDAC10Q969S8 669 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 GABRG3Q99928 467 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 RHOJQ9H4E5 214 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 SMYD2Q9NRG4 433 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 IARS2Q9NSE4 1012 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 NFKBIL1Q9UBC1 381 aaPredicted RBP19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 TBK1Q9UHD2 729 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 SCML1Q9UN30 329 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 SPO11Q9Y5K1 396 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 STON1Q9Y6Q2 735 aa19.04■□□□□ 0.64
TSPAN4-204ENST00000397404 C1orf232A0A0U1RR37 186 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 K7EQS6 105 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 MT-ND3P03897 115 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 SP100P23497 879 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 HNF1BP35680 557 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ABL2P42684 1182 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 LEPRP48357 1165 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 PPP2R2AP63151 447 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 PRKCQQ04759 706 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ARHGEF7Q14155 803 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 EFTUD2Q15029 972 aaKnown RBP eCLIP19.03■□□□□ 0.642e-6■■■□□ 18.4
TSPAN4-204ENST00000397404 FASTKD1Q53R41 847 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 KDM7AQ6ZMT4 941 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 CILP2Q8IUL8 1156 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 STK40Q8N2I9 435 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 SYNPOQ8N3V7 929 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 OR4K2Q8NGD2 314 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 GRIN3AQ8TCU5 1115 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ISL2Q96A47 359 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 DNAJC1Q96KC8 554 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 PLEKHG4BQ96PX9 1271 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 TRIM56Q9BRZ2 755 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 HDAC8Q9BY41 377 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 CATSPERZQ9NTU4 200 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 DUSP12Q9UNI6 340 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 C16orf96A6NNT2 1141 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ITGA2BP08514 1039 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 VIPR1P32241 457 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 TTPAP49638 278 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ZBTB16Q05516 673 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 MESP2Q0VG99 397 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 CDKN3Q16667 212 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 GPR33Q49SQ1 333 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 EGFLAMQ63HQ2 1017 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 KCTD16Q68DU8 428 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ZNF470Q6ECI4 717 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 DPPA4Q7L190 304 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 EXOC3L1Q86VI1 746 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ADHFE1Q8IWW8 467 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 ST13P5Q8NFI4 369 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 PIP4K2CQ8TBX8 421 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 PPM1EQ8WY54 764 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 MCMBPQ9BTE3 642 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 MKS1Q9NXB0 559 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 PKD2L2Q9NZM6 624 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 SLC2A6Q9UGQ3 507 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 COMMD10Q9Y6G5 202 aa19.03■□□□□ 0.64
TSPAN4-204ENST00000397404 XIRP2A4UGR9 3374 aa19.02■□□□□ 0.64
TSPAN4-204ENST00000397404 CD3EAPO15446 510 aaKnown RBP19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 PRPF4O43172 522 aaKnown RBP eCLIP19.02■□□□□ 0.631e-6■■■■□ 19.4
TSPAN4-204ENST00000397404 CTSLP07711 333 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 GKP32189 559 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 CD151P48509 253 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 CLCN5P51795 746 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 DCDC1P59894 354 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 TYSND1Q2T9J0 566 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 MZB1Q8WU39 189 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 TBATAQ96M53 351 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 FAM129BQ96TA1 746 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 RSPH9Q9H1X1 276 aaPredicted RBP19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 PRSS16Q9NQE7 514 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 HEBP1Q9NRV9 189 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 CTNNAL1Q9UBT7 734 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 FBXO5Q9UKT4 447 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 MRPS17Q9Y2R5 130 aaKnown RBP19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 SLC30A1Q9Y6M5 507 aa19.02■□□□□ 0.63
TSPAN4-204ENST00000397404 GOLGA8CPA6NN73 597 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 KPNA3O00505 521 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 GOT2P00505 430 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 PIRTP0C851 137 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 PMLP29590 882 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 SPAM1P38567 509 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 SOX9P48436 509 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 SERPINB8P50452 374 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 NEK3P51956 506 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 ADARP55265 1226 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 CACNG1Q06432 222 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 ITGA9Q13797 1035 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 SLC44A4Q53GD3 710 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 CRTC1Q6UUV9 634 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 LYSMD3Q7Z3D4 306 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 TTC7BQ86TV6 843 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 SRRM1Q8IYB3 904 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 OR13C4Q8NGS5 318 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 PBXIP1Q96AQ6 731 aa19.01■□□□□ 0.63
TSPAN4-204ENST00000397404 SHDQ96IW2 340 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms