RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HDDC3Q8N4P3 179 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 CALML6Q8TD86 181 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 MFSD3Q96ES6 412 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 CERS2Q96G23 380 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 RUFY1Q96T51 708 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 CYTH2Q99418 400 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 CDH19Q9H159 772 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 EPB41L4BQ9H329 900 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 PKD2L2Q9NZM6 624 aa23.59■■□□□ 1.37
TSPAN4-202ENST00000397396 ZCWPW2A0A1B0GU75 182 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 TCRBV9S1A1TA0A576 114 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 NEMP1O14524 444 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 AREL1O15033 823 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 ATP8B1O43520 1251 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 DRD3P35462 400 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 IFFO1Q0D2I5 559 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 CNTN1Q12860 1018 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 CDKN3Q16667 212 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 LRIG3Q6UXM1 1119 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 TSTD1Q8NFU3 115 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 GANCQ8TET4 914 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 FAM131CQ96AQ9 280 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 DNAJC1Q96KC8 554 aaKnown RBP23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 MRGPRX1Q96LB2 322 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 NECAB3Q96P71 396 aaPredicted RBP23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 ACSS3Q9H6R3 686 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 POLR3BQ9NW08 1133 aaPredicted RBP23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 FBXL12Q9NXK8 326 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 NSMCE4AQ9NXX6 385 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 MOCS1Q9NZB8 636 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 IL17CQ9P0M4 197 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 FETUBQ9UGM5 382 aa23.58■■□□□ 1.36
TSPAN4-202ENST00000397396 RGSL1A5PLK6 1076 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 H7C0S8 307 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 TSPAN6O43657 245 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 RNASEH2AO75792 299 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 SLC34A2O95436 690 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 SLC4A1P02730 911 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 ELFN1P0C7U0 828 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 NDUFV2P19404 249 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 MGAT5Q09328 741 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 CNGA3Q16281 694 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 TMEM52BQ4KMG9 183 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 PIP5KL1Q5T9C9 394 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 AGBL4Q5VU57 503 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 ESRP1Q6NXG1 681 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 AFTPHQ6ULP2 937 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 KIAA1324Q6UXG2 1013 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 CBARPQ8N350 705 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 AADATQ8N5Z0 425 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 FLCNQ8NFG4 579 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 OR4K2Q8NGD2 314 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 OR13J1Q8NGT2 312 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 FBF1Q8TES7 1133 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 FAM167BQ9BTA0 163 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 C20orf96Q9NUD7 363 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 KCTD5Q9NXV2 234 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 APPL1Q9UKG1 709 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 FADS3Q9Y5Q0 445 aa23.57■■□□□ 1.36
TSPAN4-202ENST00000397396 A0A1W2PP55 124 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 AURKAO14965 403 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 CLDN7O95471 211 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 GABRG2P18507 467 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 LHCGRP22888 699 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 STC1P52823 247 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 METAP1P53582 386 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 THOC5Q13769 683 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 CES3Q6UWW8 571 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 KCNMB4Q86W47 210 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 CACUL1Q86Y37 369 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 CXorf40AQ8TE69 158 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 ERLEC1Q96DZ1 483 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 SGSM3Q96HU1 749 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 ZNF778Q96MU6 729 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 FCRL3Q96P31 734 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 KDM4CQ9H3R0 1056 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 PLAC1Q9HBJ0 212 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 PPANQ9NQ55 473 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 BCCIPQ9P287 314 aaKnown RBP eCLIP23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 PLAAQ9Y263 795 aa23.56■■□□□ 1.36
TSPAN4-202ENST00000397396 MYLKQ15746 1914 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 EXOC1LA0A1B0GW35 172 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 VAPBO95292 243 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 SPAM1P38567 509 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 ILF2Q12905 390 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 RALGDSQ12967 914 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 LRRC73Q5JTD7 316 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 TSPAN33Q86UF1 283 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 RASSF3Q86WH2 238 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 OR13C4Q8NGS5 318 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 HMGB4Q8WW32 186 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 SCG3Q8WXD2 468 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 PLEKHG4BQ96PX9 1271 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 SMIM14Q96QK8 99 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 TRIM56Q9BRZ2 755 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 ROPN1BQ9BZX4 212 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 ROPN1Q9HAT0 212 aaPredicted RBP23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 ZFATQ9P243 1243 aa23.55■■□□□ 1.36
TSPAN4-202ENST00000397396 NFKBIL1Q9UBC1 381 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms