RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 NLGN3Q9NZ94 848 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 SPASTQ9UBP0 616 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 KLK13Q9UKR3 277 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 AMFRQ9UKV5 643 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 TTLL3Q9Y4R7 772 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 PCDHA3Q9Y5H8 950 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 PSMD11O00231 422 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 TRIM38O00635 465 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 SIGLEC6O43699 453 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 RFPL3O75679 317 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
SEC13-208ENST00000397109 JCHAINP01591 159 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 MCM3P25205 808 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 CDKN2BP42772 138 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 PAFAH1B1P43034 410 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 DSC2Q02487 901 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 PPARDQ03181 441 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 AP1B1Q10567 949 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 ARHGEF7Q14155 803 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 ACOX1Q15067 660 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 PROX2Q3B8N5 592 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 TFDP3Q5H9I0 405 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 TPRG1LQ5T0D9 272 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 TMPRSS7Q7RTY8 843 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 KATNAL2Q8IYT4 538 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 ZNF548Q8NEK5 533 aaPredicted RBP14.59□□□□□ -0.07
SEC13-208ENST00000397109 RBM41Q96IZ5 413 aaKnown RBP14.59□□□□□ -0.07
SEC13-208ENST00000397109 PBKQ96KB5 322 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 MCCC1Q96RQ3 725 aaPredicted RBP14.59□□□□□ -0.07
SEC13-208ENST00000397109 OSBPL9Q96SU4 736 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 IL12RB2Q99665 862 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 TLR10Q9BXR5 811 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 SLC13A1Q9BZW2 595 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 DNPEPQ9ULA0 475 aa14.59□□□□□ -0.07
SEC13-208ENST00000397109 A8MX80 341 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 KCNK1O00180 336 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 AQP9O43315 295 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 FZD6O60353 706 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 FTCDO95954 541 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 PCCBP05166 539 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 HLA-DQB2P05538 268 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 HOXC4P09017 264 aaPredicted RBP14.58□□□□□ -0.08
SEC13-208ENST00000397109 H2AFXP16104 143 aaPredicted RBP14.58□□□□□ -0.08
SEC13-208ENST00000397109 TGM2P21980 687 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 ACADVLP49748 655 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 EPHB1P54762 984 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 RPL26P61254 145 aaKnown RBP14.58□□□□□ -0.08
SEC13-208ENST00000397109 DNAJC3Q13217 504 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 NFATC4Q14934 902 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 CNGA3Q16281 694 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 CCDC157Q569K6 752 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 FAXCQ5TGI0 409 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 UNQ6494/PRO21346Q6UXR6 183 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 KDM7AQ6ZMT4 941 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 SPOCD1Q6ZMY3 1216 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 PHACTR4Q8IZ21 702 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 FAM181AQ8N9Y4 354 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 EXD1Q8NHP7 514 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 ARRDC2Q8TBH0 407 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 PIH1D2Q8WWB5 315 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 KRT35Q92764 455 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 COQ10AQ96MF6 247 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 OLFM3Q96PB7 478 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 USP29Q9HBJ7 922 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 APOBEC3BQ9UH17 382 aaKnown RBP14.58□□□□□ -0.08
SEC13-208ENST00000397109 KLF15Q9UIH9 416 aa14.58□□□□□ -0.08
SEC13-208ENST00000397109 RPL26L1Q9UNX3 145 aaKnown RBP14.58□□□□□ -0.08
SEC13-208ENST00000397109 MAP1BP46821 2468 aaKnown RBP14.58□□□□□ -0.08
SEC13-208ENST00000397109 TMEM8BA6NDV4 472 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 K7ESM1 405 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CACNB4O00305 520 aaPredicted RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 PDE2AO00408 941 aaPredicted RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 TPP1O14773 563 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 FFAR2O15552 330 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 ATP8B1O43520 1251 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CST8O60676 142 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 GIMD1P0DJR0 217 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 KELP23276 732 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 ACP1P24666 158 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 TRIM23P36406 574 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 MARCKSL1P49006 195 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 DUSP3P51452 185 aaPredicted RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 DYNLT1P63172 113 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 DAB2P98082 770 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 SMAD1Q15797 465 aaKnown RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 CCDC70Q6NSX1 233 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 ESRP1Q6NXG1 681 aaKnown RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 NPNTQ6UXI9 565 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CCNI2Q6ZMN8 369 aaPredicted RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 CREG2Q8IUH2 290 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 CBARPQ8N350 705 aaPredicted RBP14.57□□□□□ -0.08
SEC13-208ENST00000397109 SDR16C5Q8N3Y7 309 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 LMX1AQ8TE12 382 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 LRRN4Q8WUT4 740 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 GATA6Q92908 595 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 WDR92Q96MX6 357 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 NCKIPSDQ9NZQ3 722 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 PTPRBP23467 1997 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 A0A0J9YYE9 177 aa14.57□□□□□ -0.08
SEC13-208ENST00000397109 NPIPB15A6NHN6 443 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms