RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 PTPN2P17706 415 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ERCC2P18074 760 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PTPN4P29074 926 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 BCAP31P51572 246 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SPIRE1Q08AE8 756 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PGBD2Q6P3X8 592 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 GALNT18Q6P9A2 607 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 BEND5Q7L4P6 421 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 TREML1Q86YW5 311 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 C8orf59Q8N0T1 100 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 ACTRT1Q8TDG2 376 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SGCDQ92629 289 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 KIAA1143Q96AT1 154 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 FCRL2Q96LA5 508 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 DCUN1D5Q9BTE7 237 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CDT1Q9H211 546 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 BTBD7Q9P203 1132 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 MFHAS1Q9Y4C4 1052 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 DNMT1P26358 1616 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 FAM86B1E9PN63 330 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PER2O15055 1255 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SSNA1O43805 119 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 KHDRBS3O75525 346 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 AGXTP21549 392 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 MC4RP32245 332 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ALDH3A2P51648 485 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ZNF132P52740 706 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 FAAP100Q0VG06 881 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 LARS2Q15031 903 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 ZDHHC20Q5W0Z9 365 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 KYAT3Q6YP21 454 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 CHST15Q7LFX5 561 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 TMPRSS11BQ86T26 416 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 AMER2Q8N7J2 671 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ADCY4Q8NFM4 1077 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PJA1Q8NG27 643 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PRCCQ92733 491 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 UPF1Q92900 1129 aaKnown RBP eCLIP7.2□□□□□ -1.268e-7■□□□□ 9.6
UPF2-203ENST00000397053 LRRC46Q96FV0 321 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 SEMA4AQ9H3S1 761 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 NOD2Q9HC29 1040 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CNGB3Q9NQW8 809 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 DAPK2Q9UIK4 370 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 C3orf18Q9UK00 162 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 FBXO5Q9UKT4 447 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 GMPPBQ9Y5P6 360 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 FAM205AQ6ZU69 1335 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CFAP74Q9C0B2 1584 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 PRMT5O14744 637 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 KMOO15229 486 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ASNA1O43681 348 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 GJB6O95452 261 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ATP4AP20648 1035 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 ARRB1P49407 418 aaPredicted RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 GALK1P51570 392 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 RPP38P78345 283 aaKnown RBP7.2□□□□□ -1.26
UPF2-203ENST00000397053 SCRN3Q0VDG4 424 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 DPYSL3Q14195 570 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CCNYL2Q5T2Q4 361 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 MSANTD2Q6P1R3 559 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 VSTM1Q6UX27 236 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 CFAP52Q8N1V2 620 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 OR6Y1Q8NGX8 325 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 LINGO1Q96FE5 620 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 NDNQ99608 321 aa7.2□□□□□ -1.26
UPF2-203ENST00000397053 TMEM150CB9EJG8 249 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PCCBP05166 539 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 HGFP14210 728 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZNF37AP17032 561 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 IL12BP29460 328 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CCZ1BP86790 482 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CCZ1P86791 482 aaPredicted RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 SPIBQ01892 262 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 DUPD1Q68J44 220 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZFP1Q6P2D0 407 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 NUP54Q7Z3B4 507 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 FAM35AQ86V20 835 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SLC9A9Q8IVB4 645 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 OR52K2Q8NGK3 314 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 DNAJB14Q8TBM8 379 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 HDAC10Q969S8 669 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 PAIP1Q9H074 479 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 NOL6Q9H6R4 1146 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 NMUR1Q9HB89 426 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 LRCH1Q9Y2L9 728 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 SAMHD1Q9Y3Z3 626 aaKnown RBP7.19□□□□□ -1.26
UPF2-203ENST00000397053 C2CD2Q9Y426 696 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 DUSP10Q9Y6W6 482 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 USP31Q70CQ4 1352 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 ZNF521Q96K83 1311 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 A0A0X1KG70 313 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CHP2O43745 196 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 KDELR1P24390 212 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 GNALP38405 381 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 FAM110CQ1W6H9 321 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 C2orf27AQ580R0 203 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 RNF19BQ6ZMZ0 732 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 GALNTL5Q7Z4T8 443 aa7.19□□□□□ -1.26
UPF2-203ENST00000397053 CLVS1Q8IUQ0 354 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms