RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 NTSR1P30989 418 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 LEPRP48357 1165 aaKnown RBP13.61□□□□□ -0.23
MCF2L-209ENST00000397036 LIMK2P53671 638 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 TMED2Q15363 201 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 FAM46CQ5VWP2 391 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 FSTL4Q6MZW2 842 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 MRNIPQ6NTE8 343 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 SH2D5Q6ZV89 423 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 STRA8Q7Z7C7 330 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 OR4L1Q8NH43 312 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 FAM76AQ8TAV0 307 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 ACMSDQ8TDX5 336 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 ISL2Q96A47 359 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 EID2BQ96D98 161 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 PPP1R16AQ96I34 528 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 RBBP8Q99708 897 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 CDH19Q9H159 772 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 RHOJQ9H4E5 214 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 MTG2Q9H4K7 406 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 HEBP1Q9NRV9 189 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 GGT7Q9UJ14 662 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 FBXO5Q9UKT4 447 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 PSAT1Q9Y617 370 aa13.61□□□□□ -0.23
MCF2L-209ENST00000397036 MYO10Q9HD67 2058 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 C1orf232A0A0U1RR37 186 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 CCDC162PA2VCL2 907 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 C16orf96A6NNT2 1141 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 A6NNZ2 444 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 C1QTNF3-AMACRE9PGA6 284 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 UGT1A9O60656 530 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 AHSGP02765 367 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 MT-ND3P03897 115 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 EPHX1P07099 455 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 ITGA2BP08514 1039 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 ALPIP09923 528 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 HLA-EP13747 358 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 CTPS1P17812 591 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 NR1D1P20393 614 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 XIAPP98170 497 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 SLC18A2Q05940 514 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 TUBB8Q3ZCM7 444 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 SLC44A4Q53GD3 710 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 KDM7AQ6ZMT4 941 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 LYSMD3Q7Z3D4 306 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 SDCCAG8Q86SQ7 713 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 ZC3HC1Q86WB0 502 aaKnown RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 CILP2Q8IUL8 1156 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 CHPFQ8IZ52 775 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 PAF1Q8N7H5 531 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 OR6P1Q8NGX9 317 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 PIP4K2CQ8TBX8 421 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 GRIN3AQ8TCU5 1115 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 RAB7BQ96AH8 199 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 MRRFQ96E11 262 aaKnown RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 ACOX2Q99424 681 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 HDAC8Q9BY41 377 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 RSPH9Q9H1X1 276 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 CNOT10Q9H9A5 744 aaKnown RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 UGT1A7Q9HAW7 530 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 UGT1A10Q9HAW8 530 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 UGT1A8Q9HAW9 530 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 RAD18Q9NS91 495 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 NFKBIL1Q9UBC1 381 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 APPL1Q9UKG1 709 aa13.6□□□□□ -0.23
MCF2L-209ENST00000397036 CORO1CQ9ULV4 474 aaPredicted RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 SPTBN5Q9NRC6 3674 aaKnown RBP13.6□□□□□ -0.23
MCF2L-209ENST00000397036 ANKRD36A6QL64 1941 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 CCDC78A2IDD5 438 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 NPIPB15A6NHN6 443 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-209ENST00000397036 SHISA7A6NL88 538 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 H0Y858 1186 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 PSMD11O00231 422 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 CD3EAPO15446 510 aaKnown RBP13.59□□□□□ -0.23
MCF2L-209ENST00000397036 GOT2P00505 430 aaKnown RBP13.59□□□□□ -0.23
MCF2L-209ENST00000397036 ASGR2P07307 311 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 GABRB3P28472 473 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 VIPR1P32241 457 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 STC1P52823 247 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 PPP2R2AP63151 447 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 PTSQ03393 145 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 TYSND1Q2T9J0 566 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 ZNF470Q6ECI4 717 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 SDE2Q6IQ49 451 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 CERS6Q6ZMG9 384 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 DPPA4Q7L190 304 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 TTC7BQ86TV6 843 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 ADHFE1Q8IWW8 467 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 ZNF366Q8N895 744 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 ZBTB9Q96C00 473 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 SMIM14Q96QK8 99 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 GPR22Q99680 433 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 MKS1Q9NXB0 559 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 CACNA2D2Q9NY47 1150 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 IL1RAPL1Q9NZN1 696 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 B4GALT6Q9UBX8 382 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 SARDHQ9UL12 918 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 DUSP12Q9UNI6 340 aa13.59□□□□□ -0.23
MCF2L-209ENST00000397036 SMG5Q9UPR3 1016 aaKnown RBP13.59□□□□□ -0.23
MCF2L-209ENST00000397036 VPS9D1Q9Y2B5 631 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms