RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CNGB3Q9NQW8 809 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 EVLQ9UI08 416 aaPredicted RBP13.96□□□□□ -0.18
NUP98-204ENST00000397004 KCNH4Q9UQ05 1017 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 SQORQ9Y6N5 450 aa13.96□□□□□ -0.18
NUP98-204ENST00000397004 ASB14A6NK59 587 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 NR5A2O00482 541 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 IGLV3-25P01717 112 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 LEPRP48357 1165 aaKnown RBP13.95□□□□□ -0.18
NUP98-204ENST00000397004 MAXP61244 160 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 ZBED5Q49AG3 693 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 CYBRD1Q53TN4 286 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 KIAA0930Q6ICG6 404 aaPredicted RBP13.95□□□□□ -0.18
NUP98-204ENST00000397004 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 KLHL23Q8NBE8 558 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 TBC1D15Q8TC07 691 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 SENP8Q96LD8 212 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 TMEM209Q96SK2 561 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 MROH8Q9H579 483 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 CORINQ9Y5Q5 1042 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 TRIM64BA6NI03 449 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 TREHO43280 583 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 SMIM10L2AP0DMW4 78 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 SMIM10L2BP0DMW5 78 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 IMPDH1P20839 514 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 CCNCP24863 283 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 MAPK10P53779 464 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 DIO3P55073 304 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 RAB39AQ14964 217 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 KCTD21Q4G0X4 260 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 TBCELQ5QJ74 424 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 MANEALQ5VSG8 457 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 NANOGP8Q6NSW7 305 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 HACD2Q6Y1H2 254 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 FASTKD5Q7L8L6 764 aaKnown RBP13.95□□□□□ -0.18
NUP98-204ENST00000397004 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 FAIMQ9NVQ4 179 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 RNF181Q9P0P0 153 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 CDH7Q9ULB5 785 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 TCRBV5S2A0A599 114 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 EI24O14681 340 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 SUPT7LO94864 414 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 MMP2P08253 660 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 LTA4HP09960 611 aaKnown RBP13.95□□□□□ -0.18
NUP98-204ENST00000397004 PRSS56P0CW18 603 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 CLCNKBP51801 687 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 ADAM17P78536 824 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 ATP6AP1Q15904 470 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 PSMD5Q16401 504 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 UGP2Q16851 508 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 AARS2Q5JTZ9 985 aaKnown RBP13.95□□□□□ -0.18
NUP98-204ENST00000397004 DOK1Q99704 481 aa13.95□□□□□ -0.18
NUP98-204ENST00000397004 SRP72O76094 671 aaKnown RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 PNPLA4P41247 253 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 SEMA3AQ14563 771 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 OR4D1Q15615 310 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 INTS11Q5TA45 600 aaKnown RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 GPR107Q5VW38 600 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 ERO1BQ86YB8 467 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 RBM12BQ8IXT5 1001 aaKnown RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 SMYD1Q8NB12 490 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 VPS33AQ96AX1 596 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 RBM22Q9NW64 420 aaKnown RBP eCLIP13.94□□□□□ -0.187e-9■■■■□ 26.3
NUP98-204ENST00000397004 AAR2Q9Y312 384 aaKnown RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 PCDHA9Q9Y5H5 950 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 LAMA2P24043 3122 aaKnown RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 MIA3Q5JRA6 1907 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 PIP5K1BO14986 540 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 MATN3O15232 486 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 S1PR4O95977 384 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 AXLP30530 894 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 ACADVLP49748 655 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 OGFOD2Q6N063 350 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 CILP2Q8IUL8 1156 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 PPHLN1Q8NEY8 458 aaKnown RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 HDAC10Q969S8 669 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 CXorf21Q9HAI6 301 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 ATP13A1Q9HD20 1204 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 CRYL1Q9Y2S2 319 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 MAGED1Q9Y5V3 778 aaPredicted RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 DHRS12A0PJE2 317 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 MBLAC1A4D2B0 266 aaPredicted RBP13.94□□□□□ -0.18
NUP98-204ENST00000397004 ARPC2O15144 300 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 ATP6V1G1O75348 118 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 SNAP29O95721 258 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 MATN1P21941 496 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 WNT3AP56704 352 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 PLCL1Q15111 1095 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 TGFBIQ15582 683 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 PAGE3Q5JUK9 113 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 LRRTM3Q86VH5 581 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 INIPQ9NRY2 104 aa13.94□□□□□ -0.18
NUP98-204ENST00000397004 GPC4O75487 556 aa13.93□□□□□ -0.18
NUP98-204ENST00000397004 PRDX3P30048 256 aaKnown RBP13.93□□□□□ -0.18
NUP98-204ENST00000397004 AAK1Q2M2I8 961 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms