RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 MTBPQ96DY7 904 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 OR1F2PQ96R84 312 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 NAP1L4Q99733 375 aaKnown RBP4.18□□□□□ -1.74
CMC1-202ENST00000396610 TMEM47Q9BQJ4 181 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 IFIH1Q9BYX4 1025 aaKnown RBP4.18□□□□□ -1.74
CMC1-202ENST00000396610 KCNN2Q9H2S1 579 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 SLCO5A1Q9H2Y9 848 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 NDST4Q9H3R1 872 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 PRKRIP1Q9H875 184 aaPredicted RBP4.18□□□□□ -1.74
CMC1-202ENST00000396610 C17orf75Q9HAS0 396 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 HINT3Q9NQE9 182 aaKnown RBP4.18□□□□□ -1.74
CMC1-202ENST00000396610 ASAH2Q9NR71 780 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 SMC4Q9NTJ3 1288 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 AASSQ9UDR5 926 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 ERVK-11Q9UQG0 969 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 SNX9Q9Y5X1 595 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 NFS1Q9Y697 457 aa4.18□□□□□ -1.74
CMC1-202ENST00000396610 TRIP12Q14669 1992 aaPredicted RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 A0A1W2PQF6 199 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 PLSCR5A0PG75 271 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 EIF3CLB5ME19 914 aaKnown RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 VCYO14598 125 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 TMEM63AO94886 807 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 KDM4BO94953 1096 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 TGFB3P10600 412 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 TNFAIP3P21580 790 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 STX2P32856 288 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 RPS3AP61247 264 aaKnown RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 SNTA1Q13424 505 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 DRAP1Q14919 205 aaPredicted RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 OASLQ15646 514 aaKnown RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 USP41Q3LFD5 358 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 C6orf141Q5SZD1 244 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 CYP20A1Q6UW02 462 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 CRELD2Q6UXH1 353 aaPredicted RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 SLC36A4Q6YBV0 504 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 PQLC2Q6ZP29 291 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 TAOK1Q7L7X3 1001 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 SPATA6LQ8N4H0 392 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 TEX19Q8NA77 164 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 OR2AK2Q8NG84 335 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 SMARCE1Q969G3 411 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 MMABQ96EY8 250 aaPredicted RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 CTAGE1Q96RT6 745 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 KXD1Q9BQD3 176 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 STRA6Q9BX79 667 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 PDCL3Q9H2J4 239 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 GAREM1Q9H706 876 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 SLC28A3Q9HAS3 691 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 C1RLQ9NZP8 487 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 ORC3Q9UBD5 711 aaPredicted RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 ZNF69Q9UC07 566 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 MALT1Q9UDY8 824 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 LIMA1Q9UHB6 759 aaKnown RBP4.17□□□□□ -1.74
CMC1-202ENST00000396610 HAO1Q9UJM8 370 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 PROCRQ9UNN8 238 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 LRP12Q9Y561 859 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 CEPT1Q9Y6K0 416 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 UTYO14607 1347 aa4.17□□□□□ -1.74
CMC1-202ENST00000396610 GAGE7O76087 117 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 NKX2-2O95096 273 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 CLDN14O95500 239 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 GAGE12FP0CL80 117 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 GAGE12GP0CL81 117 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 GAGE12IP0CL82 117 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 HOXB6P17509 224 aaKnown RBP4.16□□□□□ -1.74
CMC1-202ENST00000396610 MAN1A1P33908 653 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 METAP2P50579 478 aaKnown RBP eCLIP4.16□□□□□ -1.74
CMC1-202ENST00000396610 DLG1Q12959 904 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 COASYQ13057 564 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 GAGE1Q13065 139 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 GAGE4Q13068 117 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 SLC39A14Q15043 492 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 SF3B4Q15427 424 aaKnown RBP eCLIP4.16□□□□□ -1.746e-7■□□□□ 11.1
CMC1-202ENST00000396610 CCNG2Q16589 344 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 CTF1Q16619 201 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 DPCR1Q3MIW9 517 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 CAPRIN2Q6IMN6 1127 aaKnown RBP4.16□□□□□ -1.74
CMC1-202ENST00000396610 PLEKHA7Q6IQ23 1121 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 FAM180BQ6P0A1 224 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 DSTYKQ6XUX3 929 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 TMTC3Q6ZXV5 915 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 MAATS1Q7Z4T9 603 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 WDR63Q8IWG1 891 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 TMEM116Q8NCL8 245 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 SMRP1Q8NCR6 262 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 SPATA22Q8NHS9 363 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 LMO3Q8TAP4 145 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 FAM149B1Q96BN6 582 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 PPP1R13BQ96KQ4 1090 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 C3orf30Q96M34 536 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 POLR1BQ9H9Y6 1135 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 MMP25Q9NPA2 562 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 OLA1Q9NTK5 396 aaKnown RBP4.16□□□□□ -1.74
CMC1-202ENST00000396610 ZNF224Q9NZL3 707 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 PSAT1Q9Y617 370 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 KCNE2Q9Y6J6 123 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 PIAS3Q9Y6X2 628 aa4.16□□□□□ -1.74
CMC1-202ENST00000396610 SMTNL1A8MU46 457 aa4.15□□□□□ -1.75
CMC1-202ENST00000396610 BTBD18B2RXH4 712 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms