RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 SKILP12757 684 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 NR1D2Q14995 579 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 E4F1Q66K89 784 aaPredicted RBP16.34■□□□□ 0.21
CLTA-203ENST00000396603 PNCKQ6P2M8 343 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 SPRED1Q7Z699 444 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 TAF8Q7Z7C8 310 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 NETO2Q8NC67 525 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 PLA2G15Q8NCC3 412 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 OR1E3Q8WZA6 343 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 ZWILCHQ9H900 591 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 FGF22Q9HCT0 170 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 ABHD10Q9NUJ1 306 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 SEPT10Q9P0V9 454 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 SCINQ9Y6U3 715 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 RP1P56715 2156 aa16.34■□□□□ 0.21
CLTA-203ENST00000396603 SSU72P8A0A1W2PR75 194 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 PMS2P1A4D2B8 440 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 HTRA2O43464 458 aaPredicted RBP16.33■□□□□ 0.2
CLTA-203ENST00000396603 MYCLP1P12525 358 aaPredicted RBP16.33■□□□□ 0.2
CLTA-203ENST00000396603 PCK1P35558 622 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 DPYSQ14117 519 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 C17orf82Q86X59 251 aaPredicted RBP16.33■□□□□ 0.2
CLTA-203ENST00000396603 FAM46DQ8NEK8 389 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 COQ10AQ96MF6 247 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 KCTD15Q96SI1 283 aaPredicted RBP16.33■□□□□ 0.2
CLTA-203ENST00000396603 TRNAU1APQ9NX07 287 aaKnown RBP16.33■□□□□ 0.2
CLTA-203ENST00000396603 LRIT1Q9P2V4 623 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 LOXL2Q9Y4K0 774 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 COL6A6A6NMZ7 2263 aa16.33■□□□□ 0.2
CLTA-203ENST00000396603 PRSS38A1L453 326 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 DDX3XO00571 662 aaKnown RBP eCLIP16.32■□□□□ 0.24e-33■■■■□ 20
CLTA-203ENST00000396603 GM2AP17900 193 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 CDC25BP30305 580 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 SCNN1BP51168 640 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 TBX2Q13207 712 aaPredicted RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 ARHGEF7Q14155 803 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 LBRQ14739 615 aaKnown RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 DPYSL2Q16555 572 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 CA9Q16790 459 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 CYP4V2Q6ZWL3 525 aaPredicted RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 ZNF438Q7Z4V0 828 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 SLITRK4Q8IW52 837 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 BBS5Q8N3I7 341 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 ARFGAP1Q8N6T3 406 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 NPWQ8N729 165 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 GPBAR1Q8TDU6 330 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 PEBP4Q96S96 227 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 TEX101Q9BY14 249 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 GSDMCQ9BYG8 508 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 FOXP3Q9BZS1 431 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 TMEM168Q9H0V1 697 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 DPEP2Q9H4A9 486 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 MRPL47Q9HD33 250 aaKnown RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 PHPT1Q9NRX4 125 aaPredicted RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
CLTA-203ENST00000396603 AKAP7Q9P0M2 348 aaPredicted RBP16.32■□□□□ 0.2
CLTA-203ENST00000396603 LRRK1Q38SD2 2015 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 SETXQ7Z333 2677 aaKnown RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 TMCO5BA8MYB1 307 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 DFFAO00273 331 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 HGSO14964 777 aaPredicted RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 CASC3O15234 703 aaKnown RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 LRCH4O75427 683 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 CPNE6O95741 557 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 FTLP02792 175 aaPredicted RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 SFTPCP11686 197 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 CCNB1P14635 433 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 CR2P20023 1033 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 MIPP30301 263 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 GPR3P46089 330 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 ILF3Q12906 894 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLTA-203ENST00000396603 LY6DQ14210 128 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 ZNF235Q14590 738 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 BOLA3Q53S33 107 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 JAMLQ86YT9 394 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 LRRC49Q8IUZ0 686 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 RAVER1Q8IY67 606 aaKnown RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 CBARPQ8N350 705 aaPredicted RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 PAF1Q8N7H5 531 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 NUS1Q96E22 293 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 SGF29Q96ES7 293 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 CCDC42Q96M95 316 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 NUDCD1Q96RS6 583 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 SEMA4CQ9C0C4 833 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 CWC15Q9P013 229 aaKnown RBP16.31■□□□□ 0.2
CLTA-203ENST00000396603 IMPACTQ9P2X3 320 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 B4GALT6Q9UBX8 382 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 PCSK1NQ9UHG2 260 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 PHTF1Q9UMS5 762 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 RNF215Q9Y6U7 377 aa16.31■□□□□ 0.2
CLTA-203ENST00000396603 H3BRJ5 948 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 AKR1B10O60218 316 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 HEXIM1O94992 359 aaKnown RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 PRKCGP05129 697 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 CYP2A6P11509 494 aaPredicted RBP16.3■□□□□ 0.2
CLTA-203ENST00000396603 VIPR1P32241 457 aa16.3■□□□□ 0.2
CLTA-203ENST00000396603 ARL4AP40617 200 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms