RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 SCNN1AP37088 669 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 PIK3CGP48736 1102 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 CRYBB1P53674 252 aaPredicted RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 LDLRAP1Q5SW96 308 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 C9orf131Q5VYM1 1079 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 TMEM214Q6NUQ4 689 aaKnown RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 IL27RAQ6UWB1 636 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 LILRA2Q8N149 483 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 BPIFB6Q8NFQ5 453 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 STAG3L4Q8TBR4 150 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 ADI1Q9BV57 179 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 CATSPERZQ9NTU4 200 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 COL1A2P08123 1366 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 A8MX80 341 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 E9PAM4 449 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 H0Y626 953 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 TRIM16O95361 564 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 STAU1O95793 577 aaKnown RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 TBX18O95935 607 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 GRIA2P42262 883 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 SLC5A3P53794 718 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 AIF1P55008 147 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 TAPT1Q6NXT6 567 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 RNF111Q6ZNA4 994 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 TMCO5AQ8N6Q1 288 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 KIFC1Q9BW19 673 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
PCDH1-203ENST00000394536 PTCH2Q9Y6C5 1203 aa16.15■□□□□ 0.18
PCDH1-203ENST00000394536 C16orf96A6NNT2 1141 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 ZNF487B1APH4 448 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 J3KR12 359 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 EI24O14681 340 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 SLC7A1P30825 629 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 TRIM16LQ309B1 348 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 TSTD2Q5T7W7 516 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 C2orf69Q8N8R5 385 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 ITFG1Q8TB96 612 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 SPPL2BQ8TCT7 592 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 PAAF1Q9BRP4 392 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 FAM124BQ9H5Z6 455 aaPredicted RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 GDAP2Q9NXN4 497 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 GMPR2Q9P2T1 348 aaKnown RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 SLC27A5Q9Y2P5 690 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 U3KQV3 271 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 FFAR3O14843 346 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 GPR42O15529 346 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 IGFBP6P24592 240 aaPredicted RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 CD52P31358 61 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 ARHGDIAP52565 204 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 C1QTNF8P60827 252 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 NAA20P61599 178 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 FSCN1Q16658 493 aaKnown RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 ABRAXAS1Q6UWZ7 409 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 SLC8A2Q9UPR5 921 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 NME7Q9Y5B8 376 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 TCAF2A6NFQ2 919 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 DEAF1O75398 565 aaPredicted RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 FKBP9O95302 570 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 KCNA5P22460 613 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 GSSP48637 474 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 AFF1P51825 1210 aaKnown RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 INTS6LQ5JSJ4 861 aaKnown RBP16.14■□□□□ 0.17
PCDH1-203ENST00000394536 CHSY3Q70JA7 882 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 FKBP9P1Q75LS8 142 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 GLT6D1Q7Z4J2 308 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 ARRDC4Q8NCT1 418 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 HMCESQ96FZ2 354 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 MAML3Q96JK9 1138 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 FCRL5Q96RD9 977 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 SPON1Q9HCB6 807 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 PCDHGB4Q9UN71 923 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 PCDHGB5Q9Y5G0 923 aa16.14■□□□□ 0.17
PCDH1-203ENST00000394536 BTBD19C9JJ37 291 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 GPR182O15218 404 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ZBTB11O95625 1053 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 FCGR1AP12314 374 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 MYBPC1Q00872 1141 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 RABL3Q5HYI8 236 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 FAM45BPQ6NSW5 357 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 TAF2Q6P1X5 1199 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 DCP1BQ8IZD4 617 aaKnown RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 FAM45AQ8TCE6 357 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ZC3H15Q8WU90 426 aaKnown RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 RUBCNLQ9H714 662 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ZFP14Q9HCL3 533 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 MARCH2Q9P0N8 246 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 KLHL33A6NCF5 533 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 CLASP2O75122 1294 aaKnown RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 CCR3P51677 355 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ZNF135P52742 658 aaPredicted RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 PRKCQQ04759 706 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 LIPEQ05469 1076 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ACAP2Q15057 778 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ZDHHC13Q8IUH4 622 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 OR13C4Q8NGS5 318 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 CASP10Q92851 521 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 POLR1EQ9GZS1 481 aaKnown RBP16.13■□□□□ 0.17
PCDH1-203ENST00000394536 OCEL1Q9H607 264 aa16.13■□□□□ 0.17
PCDH1-203ENST00000394536 ZFYVE28Q9HCC9 887 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms