RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 ITIH2P19823 946 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 DGKAP23743 735 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 CASRP41180 1078 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 CALCOCO2Q13137 446 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 HLTFQ14527 1009 aaKnown RBP eCLIP11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 SKIDA1Q1XH10 827 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 RABGAP1LQ5R372 815 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 ADGRF1Q5T601 910 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 NADSYN1Q6IA69 706 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 FOXR1Q6PIV2 292 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 C4orf22Q6V702 233 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 PTRH1Q86Y79 214 aaKnown RBP11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 LRRC49Q8IUZ0 686 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 ZNF683Q8IZ20 524 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 RTL3Q8N8U3 475 aaKnown RBP11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 FAM71DQ8N9W8 422 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 CCNYQ8ND76 341 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 WDR36Q8NI36 951 aaKnown RBP11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 WFIKKN2Q8TEU8 576 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 ANKRD7Q92527 254 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 SNF8Q96H20 258 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 QKIQ96PU8 341 aaKnown RBP eCLIP11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 FAM129AQ9BZQ8 928 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 PCDH9Q9HC56 1237 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 MPP6Q9NZW5 540 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 WHRNQ9P202 907 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 SERGEFQ9UGK8 458 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 CLEC4EQ9ULY5 219 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 SNX24Q9Y343 169 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 NEU2Q9Y3R4 380 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 MFHAS1Q9Y4C4 1052 aa11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 COL27A1Q8IZC6 1860 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP2-201ENST00000394154 NBASA2RRP1 2371 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 GOLGA6L7A0A1B0GV03 622 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 A0A1W2PP55 124 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 ESYT3A0FGR9 886 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 FFAR2O15552 330 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 KCNN4O15554 427 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 MTSS1O43312 755 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 MAP3K6O95382 1288 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 KLKB1P03952 638 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 RBL1P28749 1068 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 RPL21P46778 160 aaKnown RBP11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 CARSP49589 748 aaKnown RBP11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 CAV1Q03135 178 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 AP1B1Q10567 949 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 TRIP13Q15645 432 aaPredicted RBP11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 C5orf22Q49AR2 442 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 FAM133BQ5BKY9 247 aaKnown RBP11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 RBM44Q6ZP01 1051 aaKnown RBP11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 CPXM2Q8N436 756 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 ZSCAN1Q8NBB4 408 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 IFI44Q8TCB0 444 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 DDI1Q8WTU0 396 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 APOLD1Q96LR9 279 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 OLFM3Q96PB7 478 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 OMDQ99983 421 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 NEUROG2Q9H2A3 272 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 C10orf88Q9H8K7 445 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 ARFGAP3Q9NP61 516 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 TMEM248Q9NWD8 314 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 ANAPC2Q9UJX6 822 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 STOML2Q9UJZ1 356 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 AGO1Q9UL18 857 aaKnown RBP11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 NFU1Q9UMS0 254 aa11.15□□□□□ -0.62
VTI1BP2-201ENST00000394154 CACNA1DQ01668 2161 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 TYW5A2RUC4 315 aaKnown RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 ARHGAP42A6NI28 874 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 LATO43561 262 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 CLDN11O75508 207 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 RNASEH2AO75792 299 aaKnown RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 CNTN5O94779 1100 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 ETS1P14921 441 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 POU3F2P20265 443 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 RPL22P35268 128 aaKnown RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 NUDT1P36639 197 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 MAPKAPK2P49137 400 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 VPS41P49754 854 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 NDST2P52849 883 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 PLTPP55058 493 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 GALNT2Q10471 571 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 GPS1Q13098 491 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 CLCA4Q14CN2 919 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 PRKD1Q15139 912 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 TRADDQ15628 312 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 CST6Q15828 149 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 ARTNQ5T4W7 220 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 TTC39BQ5VTQ0 682 aaPredicted RBP11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 RFWD3Q6PCD5 774 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 FBXO38Q6PIJ6 1188 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 B4GALNT4Q76KP1 1039 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 CHST9Q7L1S5 443 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 PCGF5Q86SE9 256 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 NLRP14Q86W24 1093 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 UMODL1-AS1Q8N2C9 162 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 HTR3CQ8WXA8 447 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 RTP4Q96DX8 246 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 UCKL1Q9NWZ5 548 aa11.14□□□□□ -0.63
VTI1BP2-201ENST00000394154 NLGN3Q9NZ94 848 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms