RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 LIASO43766 372 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 PCCBP05166 539 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 GM2AP17900 193 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 RXRGP48443 463 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 CCT8P50990 548 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 THOP1P52888 689 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 PTSQ03393 145 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 PDE1CQ14123 709 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 PTK2BQ14289 1009 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 INPP5AQ14642 412 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 LONRF2Q1L5Z9 754 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 CCHCR1Q8TD31 782 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 NUS1Q96E22 293 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 OXNAD1Q96HP4 312 aaPredicted RBP19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 SRPK1Q96SB4 655 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 TMEM121Q9BTD3 319 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 ZNF148Q9UQR1 794 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 ZKSCAN5Q9Y2L8 839 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 AAR2Q9Y312 384 aaKnown RBP19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 SPTBN4Q9H254 2564 aa19.01■□□□□ 0.63
PDLIM7-204ENST00000393546 C1orf232A0A0U1RR37 186 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 DCDC2BA2VCK2 349 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 USP27XA6NNY8 438 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 GCATO75600 419 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 CLDN7O95471 211 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 CD59P13987 128 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 ETV3P41162 512 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 MTM1Q13496 603 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 CCNG2Q16589 344 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 ARHGEF18Q6ZSZ5 1173 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 Q6ZVL8 140 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 TECPR1Q7Z6L1 1165 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 RAVER1Q8IY67 606 aaKnown RBP19■□□□□ 0.63
PDLIM7-204ENST00000393546 SLC22A18ASQ8N1D0 253 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 IPMKQ8NFU5 416 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 DTD2Q96FN9 168 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 MRGPRX2Q96LB1 330 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 APOOQ9BUR5 198 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 MAGEE1Q9HCI5 957 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 GPR27Q9NS67 375 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 TP53BP1Q12888 1972 aaPredicted RBP19■□□□□ 0.63
PDLIM7-204ENST00000393546 DMXL1Q9Y485 3027 aa19■□□□□ 0.63
PDLIM7-204ENST00000393546 A0A0U1RQS6 177 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 SPTY2D1-AS1A0A0U1RR47 76 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 GOLGA6BA6NDN3 693 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 ATP1A1P05023 1023 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 PSMB4P28070 264 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 STC1P52823 247 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 IL9RQ01113 521 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 SNX1Q13596 522 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 OASLQ15646 514 aaKnown RBP18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 PARP6Q2NL67 630 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 PNCKQ6P2M8 343 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 NRSN1Q8IZ57 195 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 LRRC45Q96CN5 670 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 FSD1LQ9BXM9 530 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 SLC32A1Q9H598 525 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 HOMER3Q9NSC5 361 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.99■□□□□ 0.63
PDLIM7-204ENST00000393546 PCDHGA12O60330 932 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 ITGAVP06756 1048 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 C1SP09871 688 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 HLA-DPA1P20036 260 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 CSRP1P21291 193 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 HTR1BP28222 390 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 GDF10P55107 478 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 FZD2Q14332 565 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 SHBQ15464 509 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 SIX1Q15475 284 aaPredicted RBP18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 CDKN3Q16667 212 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 P3H1Q32P28 736 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 SIRPB2Q5JXA9 342 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 ESRP1Q6NXG1 681 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 KDM7AQ6ZMT4 941 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 DBX2Q6ZNG2 339 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 PIP4P1Q86T03 277 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 NLRP8Q86W28 1048 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 SLC25A41Q8N5S1 370 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 PLA2G15Q8NCC3 412 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 SETD7Q8WTS6 366 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 GPR63Q9BZJ6 419 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 ZFYVE1Q9HBF4 777 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 DNAJC28Q9NX36 388 aa18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 DRG1Q9Y295 367 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-204ENST00000393546 RGSL1A5PLK6 1076 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 CACNB4O00305 520 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 FLRT2O43155 660 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 SH3BP5O60239 455 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 HOXC4P09017 264 aaPredicted RBP18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 ATXN1LP0C7T5 689 aaKnown RBP18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 PIRTP0C851 137 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 TSHRP16473 764 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 ACTN2P35609 894 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 TRIM23P36406 574 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 GNG11P61952 73 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 DPTQ07507 201 aa18.97■□□□□ 0.63
PDLIM7-204ENST00000393546 BNIP3Q12983 259 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms