RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PCDHB9Q9Y5E1 797 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 CCDC182A6NF36 153 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PLIN3O60664 434 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 SERPINA1P01009 418 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 CREB1P16220 341 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PAX3P23760 479 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 TRIM40Q6P9F5 258 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 KRT77Q7Z794 578 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 LEMD2Q8NC56 503 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 GRIN3AQ8TCU5 1115 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 MAGEB10Q96LZ2 347 aaPredicted RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 WDR12Q9GZL7 423 aaKnown RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 CHRAC1Q9NRG0 131 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 GRHL1Q9NZI5 618 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PTGFRNQ9P2B2 879 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 RAB26Q9ULW5 256 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 U3KQV3 271 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 MYPNQ86TC9 1320 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 G3V2T6 193 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 SUV39H1O43463 412 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 IDH3BO43837 385 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 LRATO95237 230 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 NR2F6P10588 404 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 HDCP19113 662 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 FECHP22830 423 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 QPRTQ15274 297 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PSMD5Q16401 504 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 VWA5B1Q5TIE3 1220 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 GLYATQ6IB77 296 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PIGWQ7Z7B1 504 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PARP8Q8N3A8 854 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 POMGNT2Q8NAT1 580 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 OR52L1Q8NGH7 329 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PPP1R13LQ8WUF5 828 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 PPM1MQ96MI6 270 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 COPS8Q99627 209 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 ADI1Q9BV57 179 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 RAPGEFL1Q9UHV5 662 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 ADGRE2Q9UHX3 823 aa13.14□□□□□ -0.31
LCA5-202ENST00000392959 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
LCA5-202ENST00000392959 RPTORQ8N122 1335 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 QSOX1O00391 747 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 IRF6O14896 467 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MFSD11O43934 449 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 OR10H3O60404 316 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 CAPN1P07384 714 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 NR2F1P10589 423 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 PPIBP23284 216 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 TAPT1Q6NXT6 567 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 CACUL1Q86Y37 369 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SPPL2CQ8IUH8 684 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 COL26A1Q96A83 441 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 NXNL1Q96CM4 212 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 FAIM2Q9BWQ8 316 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 CADM1Q9BY67 442 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 RHOBTB2Q9BYZ6 727 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 POLR1DQ9Y2S0 133 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 FAM47E-STBD1D6RA91 191 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 ACADMP11310 421 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MC4RP32245 332 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 RCVRNP35243 200 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 LIMK2P53671 638 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SPIBQ01892 262 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 HLA-DQA1Q5Y7H0 255 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 BHLHB9Q6PI77 547 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MON1AQ86VX9 555 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 RBFAQ8N0V3 343 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 PNPLA8Q9NP80 782 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SLC9A8Q9Y2E8 581 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 ARIH1Q9Y4X5 557 aaPredicted RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 STON1Q9Y6Q2 735 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 H3BNX3 289 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 PQBP1O60828 265 aaKnown RBP13.13□□□□□ -0.31
LCA5-202ENST00000392959 PAGE1O75459 146 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 LRIG2O94898 1065 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 NUDT14O95848 222 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 CES1P23141 567 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 GALK1P51570 392 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 CCR4P51679 360 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 LPIN1Q14693 890 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MED22Q15528 200 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 LYPLAL1Q5VWZ2 237 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 PAGE2Q7Z2X7 111 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SPATA19Q7Z5L4 167 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SMYD1Q8NB12 490 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 MOSPD2Q8NHP6 518 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 BSNDQ8WZ55 320 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SLC47A1Q96FL8 570 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SDCBP2Q9H190 292 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 VPS4AQ9UN37 437 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 SQORQ9Y6N5 450 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 H7C0S8 307 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 CYP4B1P13584 511 aa13.13□□□□□ -0.31
LCA5-202ENST00000392959 UGT2B15P54855 530 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms