RNA–Protein interactions for RNA: ENST00000392011.6

SH3BP4-202, Transcript of SH3 domain binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3BP4, Length 5,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-202ENST00000392011 NPEPPSL1A6NEC2 478 aa17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 NFKBIEO00221 500 aa17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 SNUPNO95149 360 aaKnown RBP17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 PAICSP22234 425 aaKnown RBP17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 NMBRP28336 390 aa17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 RBM23Q86U06 439 aaKnown RBP17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 TSSK3Q96PN8 268 aa17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 OSBPL7Q9BZF2 842 aa17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 ARMC7Q9H6L4 198 aa17.23■□□□□ 0.35
SH3BP4-202ENST00000392011 A0A0J9YYE9 177 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 DNM1LO00429 736 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 PLIN3O60664 434 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 TCF4P15884 667 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 GLUD2P49448 558 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 INO80DQ53TQ3 878 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 HEATR4Q86WZ0 1026 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 KRT73Q86Y46 540 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 GATAD2AQ86YP4 633 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 USP7Q93009 1102 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 UBE2E3Q969T4 207 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 NLNQ9BYT8 704 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 MINDY3Q9H8M7 445 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 TK2O00142 265 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 SLC28A1O00337 649 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 SHOX2O60902 331 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 FKTNO75072 461 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 UGT2B4P06133 528 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 DRICH1Q6PGQ1 229 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 IRGQQ8WZA9 623 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 C7orf26Q96N11 449 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 TWNKQ96RR1 684 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 GPR21Q99679 349 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ENOPH1Q9UHY7 261 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 NEDD8-MDP1E9PL57 170 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 TRIM24O15164 1050 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 BMP10O95393 424 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 EIF2S1P05198 315 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 COL6A2P12110 1019 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 SELPP16109 830 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 PPM1AP35813 382 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ST13P50502 369 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 SOWAHAQ2M3V2 549 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 METTL3Q86U44 580 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 RAD21L1Q9H4I0 556 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 PSME2Q9UL46 239 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 RPL26L1Q9UNX3 145 aaKnown RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ASF1AQ9Y294 204 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 RFXANKO14593 260 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 SIN3BO75182 1162 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ATP6V1C1P21283 382 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 IL1R2P27930 398 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 CYP1B1Q16678 543 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ARMC4Q5T2S8 1044 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ZNF697Q5TEC3 545 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 UPF1Q92900 1129 aaKnown RBP eCLIP17.22■□□□□ 0.353e-7■■□□□ 14.2
SH3BP4-202ENST00000392011 CD101Q93033 1021 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 GATA5Q9BWX5 397 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 KIAA1522Q9P206 1035 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 ZNF180Q9UJW8 692 aa17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 POLR3HQ9Y535 204 aaPredicted RBP17.22■□□□□ 0.35
SH3BP4-202ENST00000392011 METTL18O95568 372 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 RXRGP48443 463 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 NAA20P61599 178 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 SPIDRQ14159 915 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 LPCAT4Q643R3 524 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 SCAMP5Q8TAC9 235 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 FAM192AQ9GZU8 254 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 MAF1Q9H063 256 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 SLC25A51Q9H1U9 297 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 EME2A4GXA9 379 aaPredicted RBP17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 AGRPO00253 132 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 CNPP09543 421 aaKnown RBP17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 DCAF12L1Q5VU92 463 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 FGD2Q7Z6J4 655 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 CHPFQ8IZ52 775 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 WDR36Q8NI36 951 aaKnown RBP17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 C3orf18Q9UK00 162 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 LOC100506127A0A0U1RQW1 187 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 FAM25AB3EWG3 89 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 FAM25CB3EWG5 89 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 FAM25GB3EWG6 89 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 TALDO1P37837 337 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 RALGDSQ12967 914 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 BNIP2Q12982 314 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 LYPLAL1Q5VWZ2 237 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 OFCC1Q8IZS5 231 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 RTKNQ9BST9 563 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 EPB41L4BQ9H329 900 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 TCAF1Q9Y4C2 921 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 CARNS1A5YM72 827 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 KCNU1A8MYU2 1149 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 C9JVG2 144 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 H0Y858 1186 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 MATN3O15232 486 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 PMM2O15305 246 aa17.21■□□□□ 0.35
SH3BP4-202ENST00000392011 GUCY1B2O75343 617 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms