RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 FAM237AA0A1B0GTK4 181 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 EFCAB9A8MZ26 197 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 MDM4O15151 490 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 POLR2EP19388 210 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 TBX4P57082 545 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 MYBPC1Q00872 1141 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 RPTNQ6XPR3 784 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 TMPRSS11AQ6ZMR5 421 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 R3HCC1LQ7Z5L2 792 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 GPR156Q8NFN8 814 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 PNPT1Q8TCS8 783 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 OAS3Q9Y6K5 1087 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 TCRBV7S2A1N4TA0A589 114 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 NPEPPSL1A6NEC2 478 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 RBAK-RBAKDNI3L0D1 243 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 ZBTB14O43829 449 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 ILF2Q12905 390 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 GLB1LQ6UWU2 654 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 SPATA19Q7Z5L4 167 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 RAB2BQ8WUD1 216 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 IL17RBQ9NRM6 502 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 WEE1P30291 646 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 DNASE1L3Q13609 305 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 C16orf59Q7L2K0 433 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 TRPV3Q8NET8 790 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 CLHC1Q8NHS4 586 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 ALG3Q92685 438 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 ZC3H10Q96K80 434 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 SNRNP25Q9BV90 132 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 ABCA9Q8IUA7 1624 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 RNF17Q9BXT8 1623 aaKnown RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 RPLP0P05388 317 aaKnown RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 PPM1JQ5JR12 505 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 HDAC2Q92769 488 aaKnown RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 TP53INP1Q96A56 240 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 TMEM39BQ9GZU3 492 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 CUEDC1Q9NWM3 386 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 SAMD4AQ9UPU9 718 aaKnown RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 C17orf102A2RUQ5 167 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 ENTPD3O75355 529 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 PRKD3O94806 890 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 FTH1P02794 183 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 FAM71AQ8IYT1 594 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 C10orf82Q8WW14 230 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 ING5Q8WYH8 240 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 RACGAP1Q9H0H5 632 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 RIOX1Q9H6W3 641 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 MAGEE1Q9HCI5 957 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 FKBP14Q9NWM8 211 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 AKAP7Q9P0M2 348 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 IRAK3Q9Y616 596 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 E9PCH4 1651 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 NTSP30990 170 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 PSMD5Q16401 504 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 TIGD2Q4W5G0 525 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 CLYBLQ8N0X4 340 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 SLC2A14Q8TDB8 520 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 CENPNQ96H22 339 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 MAT2BQ9NZL9 334 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 A0A0G2JPF8 293 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 HNRNPCL3B7ZW38 293 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 CCNYL3P0C7X3 344 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 HNRNPCL4P0DMR1 293 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 YAP1P46937 504 aaKnown RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 AP2S1P53680 142 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 ALKBH2Q6NS38 261 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 CNSTQ6PJW8 725 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 PHC2Q8IXK0 858 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 VANGL1Q8TAA9 524 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 ZNF285Q96NJ3 590 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 KCNH4Q9UQ05 1017 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 J3QRK9 145 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 ORC5O43913 435 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 RAB2AP61019 212 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 EN1Q05925 392 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 PIWIL4Q7Z3Z4 852 aaKnown RBP16.16■□□□□ 0.18
SHANK1-204ENST00000391814 UBR7Q8N806 425 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 FBXL8Q96CD0 374 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 TMCO6Q96DC7 493 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 ENTPD4Q9Y227 616 aa16.16■□□□□ 0.18
SHANK1-204ENST00000391814 FABP12A6NFH5 140 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 EML1O00423 815 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 NR2F6P10588 404 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 ZNF143P52747 638 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 LIPEQ05469 1076 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 OCLNQ16625 522 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 FBXO47Q5MNV8 452 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 NKAPQ8N5F7 415 aaKnown RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 LEMD2Q8NC56 503 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 PTCD2Q8WV60 388 aaKnown RBP16.15■□□□□ 0.18
SHANK1-204ENST00000391814 CEP295NLQ96MC4 621 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 SMIM22K7EJ46 135 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 DYRK3O43781 588 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 B3GAT3O94766 335 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 PAX3P23760 479 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 CCR4P51679 360 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 TAS2R41P59536 307 aa16.15■□□□□ 0.18
SHANK1-204ENST00000391814 NFIXQ14938 502 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms