RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 CDH6P55285 790 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PCDH1Q08174 1060 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SPOCK1Q08629 439 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SLFN5Q08AF3 891 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 HYAL2Q12891 473 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 TMEM115Q12893 351 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SPP2Q13103 211 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ITGB3BPQ13352 177 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 KCNJ12Q14500 433 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 NR0B2Q15466 257 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 HNRNPA1L2Q32P51 320 aaKnown RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ZNF789Q5FWF6 425 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ARHGEF16Q5VV41 709 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 DAB2IPQ5VWQ8 1189 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 C18orf63Q68DL7 685 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 KRT40Q6A162 431 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CARMIL2Q6F5E8 1435 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 WBP2NLQ6ICG8 309 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 OR6B2Q6IFH4 312 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SULT1C3Q6IMI6 304 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 FSTL4Q6MZW2 842 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ARSKQ6UWY0 536 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 MAMDC4Q6UXC1 1216 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 TMC5Q6UXY8 1006 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SYT13Q7L8C5 426 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 TMPRSS7Q7RTY8 843 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 EXOC3L1Q86VI1 746 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ZNF410Q86VK4 478 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 FAM228AQ86W67 206 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 LYSMD2Q8IV50 215 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 MCATQ8IVS2 390 aaKnown RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 KLHL7Q8IXQ5 586 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CFAP206Q8IYR0 622 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ARMC10Q8N2F6 343 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 LZTR1Q8N653 840 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CCNYL1Q8N7R7 359 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ZNF366Q8N895 744 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ZNF781Q8N8C0 355 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ASCC1Q8N9N2 400 aaKnown RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 MINDY2Q8NBR6 621 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 LEMD2Q8NC56 503 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CCNYQ8ND76 341 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 EHBP1Q8NDI1 1231 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 BBS10Q8TAM1 723 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 GPBAR1Q8TDU6 330 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ASAP3Q8TDY4 903 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 TAS1R2Q8TE23 839 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 RLN3Q8WXF3 142 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 COPS5Q92905 334 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 RAD51AP1Q96B01 352 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 C3orf49Q96BT1 292 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 RNF31Q96EP0 1072 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SLC41A3Q96GZ6 507 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 C16orf92Q96LL3 132 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ZNF558Q96NG5 402 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 TBC1D32Q96NH3 1257 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PNMA5Q96PV4 448 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ZSCAN10Q96SZ4 725 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PCDHB18PQ96TA0 734 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 GPA33Q99795 319 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 DPYSL5Q9BPU6 564 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PIGQQ9BRB3 760 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 C11orf70Q9BRQ4 267 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 WDR83Q9BRX9 315 aaKnown RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 GON7Q9BXV9 100 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 OSBPL8Q9BZF1 889 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 RAB17Q9H0T7 212 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 P2RY12Q9H244 342 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CUEDC2Q9H467 287 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 POFUT1Q9H488 388 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 IPPKQ9H8X2 491 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 MRPL47Q9HD33 250 aaKnown RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 MMP25Q9NPA2 562 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CATSPERZQ9NTU4 200 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PRMT7Q9NVM4 692 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 GPATCH2Q9NW75 528 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 BEX4Q9NWD9 120 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SMARCAL1Q9NZC9 954 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ERVK-18Q9QC07 812 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 SCOCQ9UIL1 159 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 KCND3Q9UK17 655 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 AJAP1Q9UKB5 411 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 GMEB2Q9UKD1 530 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 HCN2Q9UL51 889 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PCDHA6Q9UN73 950 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 LHX6Q9UPM6 363 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 NCKAP1Q9Y2A7 1128 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 VPS9D1Q9Y2B5 631 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 GPR55Q9Y2T6 319 aaPredicted RBP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 ADAM18Q9Y3Q7 739 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PCDHA3Q9Y5H8 950 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 PUS1Q9Y606 427 aaKnown RBP eCLIP3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 RAD54BQ9Y620 910 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CACNG2Q9Y698 323 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 NUMBLQ9Y6R0 609 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 AOX1Q06278 1338 aa3.4□□□□□ -1.87
TRAJ17-201ENST00000390520 CPDO75976 1380 aa3.39□□□□□ -1.87
TRAJ17-201ENST00000390520 PRSS38A1L453 326 aa3.39□□□□□ -1.87
TRAJ17-201ENST00000390520 OR14I1A6ND48 311 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms