RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TSHBP01222 138 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MBPP02686 304 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NR3C1P04150 777 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GIG44P09565 113 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 C6orf222P0C671 652 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KRTAP2-3P0C7H8 128 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM200BP0CF97 657 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMY1A1P0DJD3 496 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 RBMY1CP0DJD4 496 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 XRCC6P12956 609 aaKnown RBP eCLIP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GP1BBP13224 206 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 EEF2P13639 858 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MTHFD2P13995 350 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ITGA2P17301 1181 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GNAZP19086 355 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CD22P20273 847 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MATN1P21941 496 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GLRA1P23415 457 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CHRNA5P30532 468 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PRKAR1BP31321 381 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC8A1P32418 973 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ETV5P41161 510 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMPOP42166 694 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PHKA1P46020 1223 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PIK3CGP48736 1102 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF83P51522 516 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CCR5P51681 352 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SUOXP51687 545 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DGKEP52429 567 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CACNB3P54284 484 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GSDMDP57764 484 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TIRAPP58753 221 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DCDC1P59894 354 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 EIF4A1P60842 406 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 HERVK_113P61574 105 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CCT2P78371 535 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ADORA2A-AS1P86434 159 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMPRSS15P98073 1019 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CYCSP99999 105 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TIAL1Q01085 375 aaKnown RBP eCLIP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DSG1Q02413 1049 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PAX5Q02548 391 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CYP4A11Q02928 519 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KRT17Q04695 432 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DEUP1Q05D60 604 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CD300CQ08708 224 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PPIDQ08752 370 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF543Q08ER8 600 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MALLQ13021 153 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ARHGEF7Q14155 803 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GPNMBQ14956 572 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SEPT2Q15019 361 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 RRS1Q15050 365 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NFE2L2Q16236 605 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 IGFBP7Q16270 282 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FXNQ16595 210 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CDKN3Q16667 212 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ISXQ2M1V0 245 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 AAK1Q2M2I8 961 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PCOTHQ58A44 107 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF789Q5FWF6 425 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CT47A1Q5JQC4 288 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DNLZQ5SXM8 178 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 STXBP5Q5T5C0 1151 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 LINC00242Q5T6M2 205 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 YOD1Q5VVQ6 348 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 MRM1Q6IN84 353 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF770Q6IQ21 691 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ANKRD26P1Q6NSI1 321 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PSRC1Q6PGN9 363 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 INO80CQ6PI98 192 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CRTC1Q6UUV9 634 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 KRBA2Q6ZNG9 492 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 C19orf35Q6ZS72 473 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FRMD7Q6ZUT3 714 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMTC3Q6ZXV5 915 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 BRINP3Q76B58 766 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FASTKD5Q7L8L6 764 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TIPARPQ7Z3E1 657 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ISCA2Q86U28 154 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CCDC25Q86WR0 208 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM219Q86XT9 240 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM139Q8IV31 216 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PHC2Q8IXK0 858 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 HACE1Q8IYU2 909 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SPARTQ8N0X7 666 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 METTL4Q8N3J2 472 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 NKAPQ8N5F7 415 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 AADATQ8N5Z0 425 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 DDX51Q8N8A6 666 aaKnown RBP eCLIP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 RTL3Q8N8U3 475 aaKnown RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM178AQ8NBL3 297 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 PCYOX1LQ8NBM8 494 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 GMCL1P1Q8NEA9 526 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM46DQ8NEK8 389 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 OR2L8Q8NGY9 312 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 CEP70Q8NHQ1 597 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 SPATA22Q8NHS9 363 aa-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF564Q8TBZ8 553 aaPredicted RBP-0.33□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF596Q8TC21 504 aa-0.33□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms