RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 FBXL19Q6PCT2 694 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 TRIM69Q86WT6 500 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 ZC3H7AQ8IWR0 971 aaKnown RBP14.27□□□□□ -0.12
RTF1-201ENST00000389629 NODALQ96S42 347 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 GPR20Q99678 358 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 ALG2Q9H553 416 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 ZNF696Q9H7X3 374 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 SPATA31A6Q5VVP1 1343 aa14.27□□□□□ -0.12
RTF1-201ENST00000389629 RECQL5O94762 991 aaPredicted RBP14.27□□□□□ -0.13
RTF1-201ENST00000389629 CDH5P33151 784 aaPredicted RBP14.27□□□□□ -0.13
RTF1-201ENST00000389629 RAB15P59190 212 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 AARS2Q5JTZ9 985 aaKnown RBP14.27□□□□□ -0.13
RTF1-201ENST00000389629 GLT1D1Q96MS3 346 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 FEM1AQ9BSK4 669 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 HAPLN2Q9GZV7 340 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 PDZD7Q9H5P4 517 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 GOLGA2P5Q9HBQ8 144 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 PDGFCQ9NRA1 345 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 GNPTGQ9UJJ9 305 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 CAPN14A8MX76 684 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 SEC22BO75396 215 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 RGS4P49798 205 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 PGGT1BP53609 377 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 ARPC4P59998 168 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 MAXP61244 160 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 PRKG2Q13237 762 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 MADCAM1Q13477 382 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 SOWAHAQ2M3V2 549 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 FAM45BPQ6NSW5 357 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.13
RTF1-201ENST00000389629 ENKURQ8TC29 256 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 ASIC4Q96FT7 647 aa14.27□□□□□ -0.13
RTF1-201ENST00000389629 H3BMM5 538 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 NOBOXO60393 691 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 TFAP2AP05549 437 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 RXRBP28702 533 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 RENBPP51606 427 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 CLCN5P51795 746 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 MOGQ16653 247 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 RPS27LQ71UM5 84 aaKnown RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 KBTBD6Q86V97 674 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 HIPK1Q86Z02 1210 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 DNAJB3Q8WWF6 145 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 DMRTB1Q96MA1 342 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 DHRS4Q9BTZ2 278 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 TMPRSS4Q9NRS4 437 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 FAIMQ9NVQ4 179 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 DUSP12Q9UNI6 340 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 PDE10AQ9Y233 779 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 RBM47A0AV96 593 aaKnown RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 SNNO75324 88 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 RSL1D1O76021 490 aaKnown RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 ANXA6P08133 673 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 PIRTP0C851 137 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 LHX1P48742 406 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 MBTD1Q05BQ5 628 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 STXBP5Q5T5C0 1151 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 PDPRQ8NCN5 879 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 OR56A4Q8NGH8 313 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 HEXDCQ8WVB3 486 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 ZFP14Q9HCL3 533 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 RCOR3Q9P2K3 495 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 MT-CYBP00156 380 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 HIST1H2AGP0C0S8 130 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 HIST1H2ADP20671 130 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 CD86P42081 329 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 TAS2R39P59534 338 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 TRIP4Q15650 581 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 IQSEC1Q6DN90 963 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 DENND5AQ6IQ26 1287 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 CHSY3Q70JA7 882 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 SLC44A2Q8IWA5 706 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 C19orf18Q8NEA5 215 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 HIST1H2AHQ96KK5 128 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 OLFM1Q99784 485 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 HIST1H2AJQ99878 128 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 H2AFJQ9BTM1 129 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 ADAMTS7Q9UKP4 1686 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 CCL22O00626 93 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 COL6A2P12110 1019 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 YWHAQP27348 245 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 TUBA4AP68366 448 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 FSCN1Q16658 493 aaKnown RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 ZFP69Q49AA0 526 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 NECAB2Q7Z6G3 386 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 CDH24Q86UP0 819 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
RTF1-201ENST00000389629 GAB3Q8WWW8 586 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 TAS2R13Q9NYV9 303 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 KLHL3Q9UH77 587 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 SNX10Q9Y5X0 201 aa14.26□□□□□ -0.13
RTF1-201ENST00000389629 BDNFP23560 247 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 MYBPC1Q00872 1141 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 C10orf120Q5SQS8 335 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 NIPAL1Q6NVV3 410 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 RIOX2Q8IUF8 465 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 CPSF7Q8N684 471 aaKnown RBP14.25□□□□□ -0.13
RTF1-201ENST00000389629 HBEGFQ99075 208 aa14.25□□□□□ -0.13
RTF1-201ENST00000389629 RHOBTB2Q9BYZ6 727 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms