RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 ALBP02768 609 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 TNFSF9P41273 254 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CASP3P42574 277 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 AP3M2P53677 418 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 DPY19L1Q2PZI1 675 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CCDC14Q49A88 953 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 RETREG3Q86VR2 466 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 TTC39CQ8N584 583 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ROPN1LQ96C74 230 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CDK5RAP1Q96SZ6 601 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CHRAC1Q9NRG0 131 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 INTS10Q9NVR2 710 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ABCD2Q9UBJ2 740 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 BAG5Q9UL15 447 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ALX3O95076 343 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 GPIP06744 558 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ABCB1P08183 1280 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 HSD17B1P14061 328 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 GFAPP14136 432 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CD40LGP29965 261 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 KRT6CP48668 564 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 STAT5BP51692 787 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 PGGT1BP53609 377 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ORC1Q13415 861 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 LAMC2Q13753 1193 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 PRPSAP1Q14558 356 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 GEN1Q17RS7 908 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ZIK1Q3SY52 487 aaPredicted RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CNSTQ6PJW8 725 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 WDR49Q8IV35 697 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 LEMD2Q8NC56 503 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 HCAR2Q8TDS4 363 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 HTR3CQ8WXA8 447 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 PIWIL1Q96J94 861 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 PPP1R16BQ96T49 567 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 MCMBPQ9BTE3 642 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 PORCNQ9H237 461 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ADNPQ9H2P0 1102 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 CNGB3Q9NQW8 809 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 SLC39A10Q9ULF5 831 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 RUVBL2Q9Y230 463 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 ANKRD6Q9Y2G4 727 aa14.68□□□□□ -0.06
VPS9D1-201ENST00000389386 WDR90Q96KV7 1748 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 A0A0G2JLL6 359 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 GOLGA8CPA6NN73 597 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 SOCS7O14512 581 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 AREL1O15033 823 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 IDH3BO43837 385 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 NPHS1O60500 1241 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 GRAP2O75791 330 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 OSTNP61366 133 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CAPSQ13938 189 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 TMC5Q6UXY8 1006 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CATSPER4Q7RTX7 472 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 PRRT2Q7Z6L0 340 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 FSTL5Q8N475 847 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CHST13Q8NET6 341 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 ZNF669Q96BR6 464 aaPredicted RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 ALOXE3Q9BYJ1 711 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 OR2B2Q9GZK3 357 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 SLCO3A1Q9UIG8 710 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 TLK1Q9UKI8 766 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 MICAL2O94851 1124 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 GSNP06396 782 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 NAMPTP43490 491 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 RAP1GAPP47736 663 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 NR2C2P49116 596 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CLK3P49761 638 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 PPP5CP53041 499 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 GP2P55259 537 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 BNIP2Q12982 314 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 EML3Q32P44 896 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 TSTD2Q5T7W7 516 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 THAP5Q7Z6K1 395 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 FUNDC1Q8IVP5 155 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 BRSK2Q8IWQ3 736 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 NAT16Q8N8M0 369 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 OR7A2PQ8NGA2 310 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 SUN5Q8TC36 379 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CHAC2Q8WUX2 184 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 KCTD4Q8WVF5 259 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 VPS39Q96JC1 886 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CEP41Q9BYV8 373 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 XYLT2Q9H1B5 865 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 NGRNQ9NPE2 291 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 QPCTLQ9NXS2 382 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 GTSE1Q9NYZ3 720 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 MAP10Q9P2G4 905 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 CEP350Q5VT06 3117 aa14.67□□□□□ -0.06
VPS9D1-201ENST00000389386 ISPDA4D126 451 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 C16orf96A6NNT2 1141 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 M0R3G1 203 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 ARPC2O15144 300 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 INMTO95050 263 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 CYP2C8P10632 490 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 CD68P34810 354 aaPredicted RBP14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 GPD2P43304 727 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 C1QTNF8P60827 252 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 TSPY1Q01534 308 aa14.66□□□□□ -0.06
VPS9D1-201ENST00000389386 PIGFQ07326 219 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms