RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 BHLHE22Q8NFJ8 381 aaPredicted RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 USP13Q92995 863 aaPredicted RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 TOP1MTQ969P6 601 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PTERQ96BW5 349 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 DNAJC1Q96KC8 554 aaKnown RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 ERVK-6Q9BXR3 956 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 UNC93B1Q9H1C4 597 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 POLR3BQ9NW08 1133 aaPredicted RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 SUCOQ9UBS9 1254 aaKnown RBP14.97□□□□□ -0.01
SCFD2-201ENST00000388940 RIMS3Q9UJD0 308 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 CRYL1Q9Y2S2 319 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 GBF1Q92538 1859 aa14.97□□□□□ -0.01
SCFD2-201ENST00000388940 PRSS51A0A1B0GVH4 220 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 CCDC162PA2VCL2 907 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 F5H5T6 163 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 DENRO43583 198 aaKnown RBP14.96□□□□□ -0.01
SCFD2-201ENST00000388940 NDST3O95803 873 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 TYSND1Q2T9J0 566 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 UGT3A2Q3SY77 523 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 MMEL1Q495T6 779 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 RARS2Q5T160 578 aaKnown RBP14.96□□□□□ -0.01
SCFD2-201ENST00000388940 HACD2Q6Y1H2 254 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 RNF19BQ6ZMZ0 732 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 CLYBLQ8N0X4 340 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 PHC3Q8NDX5 983 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 ADCY4Q8NFM4 1077 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 OR4L1Q8NH43 312 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 BLOC1S5Q8TDH9 187 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 ASB9Q96DX5 294 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 CDK5RAP1Q96SZ6 601 aaKnown RBP14.96□□□□□ -0.01
SCFD2-201ENST00000388940 MGME1Q9BQP7 344 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 TSEN34Q9BSV6 310 aaKnown RBP14.96□□□□□ -0.01
SCFD2-201ENST00000388940 CRISPLD1Q9H336 500 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 CCSER2Q9H7U1 834 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 INTS10Q9NVR2 710 aaKnown RBP14.96□□□□□ -0.01
SCFD2-201ENST00000388940 MARCH5Q9NX47 278 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 RNF186Q9NXI6 227 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 FIS1Q9Y3D6 152 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 ARL5AQ9Y689 179 aa14.96□□□□□ -0.01
SCFD2-201ENST00000388940 STX16-NPEPL1H3BU86 382 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 H7C4K7 107 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 AP1G1O43747 822 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 TLR5O60602 858 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 SUPT7LO94864 414 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 ALDH2P05091 517 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 SNRPB2P08579 225 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 ZCCHC18P0CG32 403 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 PSMA3P25788 255 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 STC1P52823 247 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 ARPP19P56211 112 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 MRPS22P82650 360 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 CAP1Q01518 475 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 GRAMD1BQ3KR37 738 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 CYHR1Q6ZMK1 362 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 RPS27LQ71UM5 84 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 PIM3Q86V86 326 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 TICAM1Q8IUC6 712 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 SPNS2Q8IVW8 549 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 SH3RF2Q8TEC5 729 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 TMA16Q96EY4 203 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 LRGUKQ96M69 825 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 CASD1Q96PB1 797 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 SEPT5Q99719 369 aaPredicted RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 DDX50Q9BQ39 737 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 AARSD1Q9BTE6 412 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 SLC25A23Q9BV35 468 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 TTLL2Q9BWV7 592 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 TFB2MQ9H5Q4 396 aaKnown RBP14.96□□□□□ -0.02
SCFD2-201ENST00000388940 CATSPERZQ9NTU4 200 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 CACNA2D2Q9NY47 1150 aa14.96□□□□□ -0.02
SCFD2-201ENST00000388940 FBP2O00757 339 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 ACSL4O60488 711 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 GJB3O75712 270 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 FESP07332 822 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 ZNF37AP17032 561 aaPredicted RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 HOXD9P28356 352 aaPredicted RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 ELAVL2Q12926 359 aaKnown RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 TRAP1Q12931 704 aaKnown RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 TRIM25Q14258 630 aaKnown RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 SEMA3AQ14563 771 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 PPP1R3AQ16821 1122 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 AGKQ53H12 422 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 FOXB2Q5VYV0 432 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 REP15Q6BDI9 236 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 RSPO2Q6UXX9 243 aaPredicted RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 ABI1Q8IZP0 508 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 LGI2Q8N0V4 545 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 OR13C4Q8NGS5 318 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 DCUN1D1Q96GG9 259 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 CEP295NLQ96MC4 621 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 NLE1Q9NVX2 485 aaPredicted RBP14.95□□□□□ -0.02
SCFD2-201ENST00000388940 SEPT3Q9UH03 358 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 TBC1D30Q9Y2I9 924 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 BPTFQ12830 3046 aa14.95□□□□□ -0.02
SCFD2-201ENST00000388940 SLC38A8A6NNN8 435 aa14.94□□□□□ -0.02
SCFD2-201ENST00000388940 ENPP3O14638 875 aa14.94□□□□□ -0.02
SCFD2-201ENST00000388940 TRIM24O15164 1050 aa14.94□□□□□ -0.02
SCFD2-201ENST00000388940 TRPA1O75762 1119 aa14.94□□□□□ -0.02
SCFD2-201ENST00000388940 CRTAMO95727 393 aa14.94□□□□□ -0.02
SCFD2-201ENST00000388940 CLCN2P51788 898 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms