RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 KCNA5P22460 613 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 DNAJB1P25685 340 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PSMA4P25789 261 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PTX3P26022 381 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 CLEC16AQ2KHT3 1053 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 IQCCQ4KMZ1 466 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RAP1GAP2Q684P5 730 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 BEND4Q6ZU67 534 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 ANKS3Q6ZW76 656 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 NIPA1Q7RTP0 329 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 TRMT1LQ7Z2T5 733 aaKnown RBP9.39□□□□□ -0.91
PTPRA-204ENST00000380393 NECAB2Q7Z6G3 386 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 FAM167AQ96KS9 214 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 PPP1R16BQ96T49 567 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 GAL3ST1Q99999 423 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 MBD2Q9UBB5 411 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 LRFN2Q9ULH4 789 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 SCML1Q9UN30 329 aa9.39□□□□□ -0.91
PTPRA-204ENST00000380393 RNF103-CHMP3A0A140T963 221 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 CLRN2A0PK11 232 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 E5RI56 91 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 B4GAT1O43505 415 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 PSTPIP1O43586 416 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 UGT2B10P36537 528 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 HADHBP55084 474 aaKnown RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 RIN1Q13671 783 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 BAATQ14032 418 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 PLCL1Q15111 1095 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 COLEC12Q5KU26 742 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 MAMDC4Q6UXC1 1216 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 LINC00523Q86TU6 105 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 SFRP1Q8N474 314 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 CBR4Q8N4T8 237 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 PIWIL2Q8TC59 973 aaKnown RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 SLC20A1Q8WUM9 679 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 MALT1Q9UDY8 824 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 PLLPQ9Y342 182 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 KLF2Q9Y5W3 355 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 CAPN5O15484 640 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 CPB1P15086 417 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 JUNBP17275 347 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 TNNI3P19429 210 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 GLDCP23378 1020 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 AP1S2P56377 157 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 TEX44Q53QW1 395 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 CDHR3Q6ZTQ4 885 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 TBC1D21Q8IYX1 336 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 UBR7Q8N806 425 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 NAT16Q8N8M0 369 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 ZFAND1Q8TCF1 268 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 KLHL6Q8WZ60 621 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 MMP19Q99542 508 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 SLC6A15Q9H2J7 730 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 TAS2R9Q9NYW1 312 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 PIM2Q9P1W9 311 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 TRPS1Q9UHF7 1281 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 PCDHGA2Q9Y5H1 932 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 DUOX1Q9NRD9 1551 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 RGPD3A6NKT7 1758 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 RGPD4Q7Z3J3 1758 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 NRXN2Q9P2S2 1712 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 OR6C70A6NIJ9 312 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 GOLGA8SH3BPF8 625 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 STX16-NPEPL1H3BU86 382 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 LYPLA1O75608 230 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 STAU1O95793 577 aaKnown RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 NR3C1P04150 777 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 RAB3AP20336 220 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 HTR1BP28222 390 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 GDI2P50395 445 aaKnown RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 KLF10Q13118 480 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 ALCAMQ13740 583 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 EFR3AQ14156 821 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 KCNJ11Q14654 390 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 BTBD16Q32M84 506 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 ARMC4Q5T2S8 1044 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF425Q6IV72 752 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 NDNFQ8TB73 568 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 URGCPQ8TCY9 931 aa9.38□□□□□ -0.91
PTPRA-204ENST00000380393 CINPQ9BW66 212 aaPredicted RBP9.38□□□□□ -0.91
PTPRA-204ENST00000380393 C10orf71Q711Q0 1435 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 CYP3A7-CYP3A51PA0A087WV96 503 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 DENND3A2RUS2 1198 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 CCDC182A6NF36 153 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 ZNF487B1APH4 448 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 SSX4O60224 188 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 RGS20O76081 388 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 CYP3A7P24462 503 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 DGKQP52824 942 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 HDDC2Q7Z4H3 204 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 MRPL10Q7Z7H8 261 aaKnown RBP9.37□□□□□ -0.91
PTPRA-204ENST00000380393 PIK3C3Q8NEB9 887 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 DCAKDQ8WVC6 231 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 FKBP10Q96AY3 582 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 PPP1R36Q96LQ0 422 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 MOGAT1Q96PD6 335 aa9.37□□□□□ -0.91
PTPRA-204ENST00000380393 LENG8Q96PV6 779 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms