RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 TRANK1O15050 2925 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 OBSL1O75147 1896 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 C2orf81A6NN90 581 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TLL1O43897 1013 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ARHGEF15O94989 841 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 OLFM2O95897 454 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 GOT2P00505 430 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 KLKB1P03952 638 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 MBL2P11226 248 aaPredicted RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 GLDCP23378 1020 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 MPSTP25325 297 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 SUOXP51687 545 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ARSDP51689 593 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 NAGLUP54802 743 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 KDSRQ06136 332 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TWF1Q12792 350 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 USP4Q13107 963 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 GALNT3Q14435 633 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ZNF460Q14592 562 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 E2F5Q15329 346 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 SKIV2LQ15477 1246 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TRMT5Q32P41 509 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 INO80DQ53TQ3 878 aaPredicted RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ARL13AQ5H913 290 aaPredicted RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 SH2D4BQ5SQS7 431 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 SCUBE1Q8IWY4 988 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TMEM199Q8N511 208 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 OR4L1Q8NH43 312 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 USP13Q92995 863 aaPredicted RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 DNAJC1Q96KC8 554 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TBATAQ96M53 351 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TRMOQ9BU70 441 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 TDRD1Q9BXT4 1180 aaKnown RBP10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ADGRE3Q9BY15 652 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 MUC3BQ9H195 1237 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 POMKQ9H5K3 350 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 HACD3Q9P035 362 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 CDYLQ9Y232 598 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 ZNF510Q9Y2H8 683 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 C15orf41Q9Y2V0 281 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 INSL5Q9Y5Q6 135 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 MTCH2Q9Y6C9 303 aa10.49□□□□□ -0.73
POLR2J3-201ENST00000379340 CCDC189A1A4V9 331 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 TTC24A2A3L6 582 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 AURKAO14965 403 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 IPO13O94829 963 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 ANP32DO95626 131 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 F11P03951 625 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CCDC166P0CW27 439 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 TPBGLP0DKB5 382 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 IRF1P10914 325 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 TFEBP19484 476 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 NCF2P19878 526 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CPA2P48052 419 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 SCNN1BP51168 640 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 ZNF140P52738 457 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 STC1P52823 247 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 NAA20P61599 178 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 NFKB2Q00653 900 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 NAA25Q14CX7 972 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 HERC3Q15034 1050 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CYTH1Q15438 398 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 SLC9B1Q4ZJI4 515 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 ZNF789Q5FWF6 425 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 RNF219Q5W0B1 726 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 PPP2R2DQ66LE6 453 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CXorf57Q6NSI4 855 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 TRIM67Q6ZTA4 783 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 SPRED2Q7Z698 418 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 DNAJB7Q7Z6W7 309 aaPredicted RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 MFN1Q8IWA4 741 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 FAM217AQ8IXS0 508 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CPSF7Q8N684 471 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 TXNDC5Q8NBS9 432 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 OR52K2Q8NGK3 314 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 STMN2Q93045 179 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 RMDN1Q96DB5 314 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 NDNQ99608 321 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 RNF38Q9H0F5 515 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 SYTL2Q9HCH5 934 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 MRPL17Q9NRX2 175 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 GKN1Q9NS71 199 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 LSM7Q9UK45 103 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 L3MBTL1Q9Y468 752 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 ARL5AQ9Y689 179 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CXorf51AA0A1B0GTR3 108 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CCDC162PA2VCL2 907 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 C2orf78A6NCI8 922 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 A8MT66 165 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 H0Y626 953 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CBX4O00257 560 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 GRID2O43424 1007 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 SMIM24O75264 130 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 BAIAP3O94812 1187 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 LUC7L3O95232 432 aaKnown RBP10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 FGBP02675 491 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 CHRNGP07510 517 aa10.48□□□□□ -0.73
POLR2J3-201ENST00000379340 PFKLP17858 780 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms