RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 TRMT5Q32P41 509 aaKnown RBP13.3□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF677Q86XU0 584 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 COL23A1Q86Y22 540 aaPredicted RBP13.3□□□□□ -0.28
HIPK3-202ENST00000379016 CCNJLQ8IV13 435 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 LIX1Q8N485 282 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF565Q8N9K5 539 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 KCT2Q8NC54 265 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 OR5T1Q8NG75 326 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 OR52K1Q8NGK4 314 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 SNTG2Q9NY99 539 aa13.3□□□□□ -0.28
HIPK3-202ENST00000379016 PEX11AO75192 247 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TRAPPC6AO75865 159 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PROCP04070 461 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SLC35G4P0C7Q5 338 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 FUT4P22083 530 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TKTP29401 623 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 GMPSP49915 693 aaPredicted RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 CLCN3P51790 818 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 NR0B1P51843 470 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PPP3CAQ08209 521 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 RHEBQ15382 184 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SNAPC1Q16533 368 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SCGB2B2Q4G0G5 96 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 FAM83AQ86UY5 434 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TRMT10AQ8TBZ6 339 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 ASB2Q96Q27 587 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 ASF1AQ9Y294 204 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 REXO2Q9Y3B8 237 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 CPDO75976 1380 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 BUD23O43709 281 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TLX3O43711 291 aaPredicted RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 NRP2O60462 931 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 HSD11B1P28845 292 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TNFAIP8L3Q5GJ75 292 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TTC27Q6P3X3 843 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 MTFR2Q6P444 385 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PRR23BQ6ZRT6 265 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PANX1Q96RD7 426 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 BRD9Q9H8M2 597 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 MTMR10Q9NXD2 777 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 CORO2BQ9UQ03 480 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 BTRCQ9Y297 605 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 ZNF20P17024 532 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 RPL6Q02878 288 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PLET1Q6UQ28 207 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SSX3Q99909 188 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 UXTQ9UBK9 157 aaPredicted RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 MUTP22033 750 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 UBAP2Q5T6F2 1119 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 FIP1L1Q6UN15 594 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 GPR65Q8IYL9 337 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 ZSCAN4Q8NAM6 433 aaPredicted RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 MTMR8Q96EF0 704 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 XKR8Q9H6D3 395 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 PCCBP05166 539 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 LINGO3P0C6S8 592 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 RPL38P63173 70 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 CCNI2Q6ZMN8 369 aaPredicted RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 CCSER2Q9H7U1 834 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 MRPL17Q9NRX2 175 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 ARPC2O15144 300 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 USP17L7P0C7H9 530 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 RAB4BP61018 213 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 LARS2Q15031 903 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 ZFP1Q6P2D0 407 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SPOCD1Q6ZMY3 1216 aa13.29□□□□□ -0.28
HIPK3-202ENST00000379016 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
HIPK3-202ENST00000379016 SNRPD1P62314 119 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 DSG2Q14126 1118 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 NUP54Q7Z3B4 507 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 FBXO33Q7Z6M2 555 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 POP1Q99575 1024 aaKnown RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SLC5A7Q9GZV3 580 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 DGKBQ9Y6T7 804 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 A0A087X1B8 175 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 E7EQ34 232 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 CCNKO75909 580 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 ATXN7L2Q5T6C5 722 aaPredicted RBP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 OSMRQ99650 979 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 HTATIP2Q9BUP3 242 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 RHPN2P1A8MT19 583 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 CLDN4O14493 209 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SULT1B1O43704 296 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 UBOX5O94941 541 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SDC2P34741 201 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 CTNNB1P35222 781 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 FXR2P51116 673 aaKnown RBP eCLIP13.28□□□□□ -0.28
HIPK3-202ENST00000379016 TNK2Q07912 1038 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 NPLOC4Q8TAT6 608 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 SMARCD2Q92925 531 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 TBX20Q9UMR3 447 aa13.28□□□□□ -0.28
HIPK3-202ENST00000379016 CAPN14A8MX76 684 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms