RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 ABHD11Q8NFV4 315 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 TTC9Q92623 222 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 CCDC127Q96BQ5 260 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 ATG4CQ96DT6 458 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 OR52B2Q96RD2 323 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 FTHL17Q9BXU8 183 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 PCIF1Q9H4Z3 704 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 WDR41Q9HAD4 459 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 MRM3Q9HC36 420 aaKnown RBP6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 AGPAT4Q9NRZ5 378 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 SACM1LQ9NTJ5 587 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 RBAKQ9NYW8 714 aaPredicted RBP6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 H2AFY2Q9P0M6 372 aaPredicted RBP6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 CNOT6Q9ULM6 557 aaKnown RBP6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 PCDHA1Q9Y5I3 950 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 MGAMO43451 1857 aa6.71□□□□□ -1.34
CDKAL1-202ENST00000378610 RHPN2P1A8MT19 583 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 CLDN25C9JDP6 229 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 H0Y858 1186 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 CBX4O00257 560 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 DNAJB5O75953 348 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 UFL1O94874 794 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 C4BPAP04003 597 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 RPL10P27635 214 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 IL1R2P27930 398 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 RFC1P35251 1148 aaPredicted RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 HADHAP40939 763 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 OPRL1P41146 370 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 QARSP47897 775 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TPD52P55327 224 aaPredicted RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ADARB1P78563 741 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 MERTKQ12866 999 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 SELPLGQ14242 412 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 FRG1Q14331 258 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 N4BP2L1Q5TBK1 243 aaPredicted RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 KIAA1841Q6NSI8 718 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 NAPRTQ6XQN6 538 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 KRT27Q7Z3Y8 459 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 DCP2Q8IU60 420 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 LIX1LQ8IVB5 337 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TMEM151AQ8N4L1 468 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ATG16L2Q8NAA4 619 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ZNF486Q96H40 463 aaPredicted RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 DACH2Q96NX9 599 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 SH2D3AQ9BRG2 576 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 C11orf70Q9BRQ4 267 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 NTPCRQ9BSD7 190 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 DEFB129Q9H1M3 183 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 MRPL40Q9NQ50 206 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 GPRC5CQ9NQ84 441 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TLR9Q9NR96 1032 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TMEM181Q9P2C4 612 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ENPP5Q9UJA9 477 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ZNF214Q9UL59 606 aaPredicted RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 THSD7AQ9UPZ6 1657 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 GRID2O43424 1007 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 AVILO75366 819 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ULK1O75385 1050 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 VAPBO95292 243 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 RASAL1O95294 804 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 HSPA8P11142 646 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 UBL4AP11441 157 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 BMP1P13497 986 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 IL1R1P14778 569 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 NME1P15531 152 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TPSB2P20231 275 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 LSSP48449 732 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 RPL10AP62906 217 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 PHC1P78364 1004 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 RPL6Q02878 288 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 BMPR2Q13873 1038 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 SEMA3AQ14563 771 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TPSAB1Q15661 275 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 AOC3Q16853 763 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 SHROOM1Q2M3G4 852 aaPredicted RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TRIM16LQ309B1 348 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 LRIT3Q3SXY7 679 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 C2CD6Q53TS8 623 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 GPR107Q5VW38 600 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 RPUSD3Q6P087 351 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 GALNT18Q6P9A2 607 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ZNF773Q6PK81 442 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 SIX6OS1Q8N1H7 587 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ZNF781Q8N8C0 355 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 PIK3C3Q8NEB9 887 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 HMGCLL1Q8TB92 370 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 EBNA1BP2Q99848 306 aaKnown RBP6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 LRFN3Q9BTN0 628 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 ZNF518BQ9C0D4 1074 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 FANCFQ9NPI8 374 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 TFCP2L1Q9NZI6 479 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 SRPK3Q9UPE1 567 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 UGT2A1Q9Y4X1 527 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 LOC100653049A0A140TA62 436 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 B3GALT2O43825 422 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 IDH3BO43837 385 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 XYLBO75191 536 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 LRCH4O75427 683 aa6.7□□□□□ -1.34
CDKAL1-202ENST00000378610 KRT34O76011 436 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms