RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SNPHO15079 494 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 NPM3O75607 178 aaKnown RBP15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 AGXTP21549 392 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 NMBRP28336 390 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CDC20Q12834 499 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CTU2Q2VPK5 515 aaKnown RBP15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 ABHD15Q6UXT9 468 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 RFPL4BQ6ZWI9 263 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 IFNEQ86WN2 208 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 EXOC8Q8IYI6 725 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 ROPN1LQ96C74 230 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 C17orf80Q9BSJ5 609 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 NTN4Q9HB63 628 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 PAK1IP1Q9NWT1 392 aaPredicted RBP15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 TSPAN16Q9UKR8 245 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CARD8Q9Y2G2 431 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 PCDHGA8Q9Y5G5 932 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 MGEA5O60502 916 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 MSCO60682 206 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 RFPL2O75678 378 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CDH1P12830 882 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 TSPAN8P19075 237 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 ENDOUP21128 410 aaKnown RBP15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 FSHRP23945 695 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CASP3P42574 277 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 HIST2H2ACQ16777 129 aaPredicted RBP15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CUZD1Q86UP6 607 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 PSMA8Q8TAA3 256 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 CLEC4CQ8WTT0 213 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 TSNARE1Q96NA8 513 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 SEPHS2Q99611 448 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 RHOBTB2Q9BYZ6 727 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 TMEM39BQ9GZU3 492 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 MIR1-1HGQ9H1L0 117 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 C2orf40Q9H1Z8 148 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 MOV10Q9HCE1 1003 aaKnown RBP15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 TMPRSS4Q9NRS4 437 aa15.69■□□□□ 0.1
CSNK1A1-202ENST00000377843 TTC34A8MYJ7 566 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 ZNF487B1APH4 448 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 AHSGP02765 367 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PCMT1P22061 227 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PLK1P53350 603 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 VBP1P61758 197 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 XKR3Q5GH77 459 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 HEATR4Q86WZ0 1026 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 NIM1KQ8IY84 436 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 C1orf127Q8N9H9 656 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 LRRC4Q9HBW1 653 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 ABCB10Q9NRK6 738 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 HACD3Q9P035 362 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PCDHB3Q9Y5E6 796 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 A0A0J9YYE9 177 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 UPK1AO00322 258 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 UBFD1O14562 309 aaKnown RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 OGTO15294 1046 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 ASNA1O43681 348 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 LDLRP01130 860 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 GPIP06744 558 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PRKCAP17252 672 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 MAGP20916 626 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 RACK1P63244 317 aaKnown RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PHC1P78364 1004 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 IFRD2Q12894 506 aaPredicted RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 LAMC2Q13753 1193 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 RABL3Q5HYI8 236 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 LARP4Q71RC2 724 aaKnown RBP eCLIP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PID1Q7Z2X4 250 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PIWIL4Q7Z3Z4 852 aaKnown RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 THAP5Q7Z6K1 395 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 SLC22A15Q8IZD6 547 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 SIX5Q8N196 739 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 DNAAF3Q8N9W5 541 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 CCNYQ8ND76 341 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 CHDHQ8NE62 594 aaPredicted RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 MRPL46Q9H2W6 279 aaKnown RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 CPNE5Q9HCH3 593 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 JPH1Q9HDC5 661 aaPredicted RBP15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 C8orf4Q9NR00 106 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 TESMINQ9Y4I5 508 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PTGDR2Q9Y5Y4 395 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 PCNTO95613 3336 aa15.68■□□□□ 0.1
CSNK1A1-202ENST00000377843 TNPO2O14787 897 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 DYRK3O43781 588 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 TOMM70O94826 608 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 GABARAPO95166 117 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 TNNC2P02585 160 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 TGFBR1P36897 503 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 EIF2DP41214 584 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 ALDH7A1P49419 539 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 ILF2Q12905 390 aaKnown RBP15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 BNIP2Q12982 314 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 ANKRD34AQ69YU3 496 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 IL31Q6EBC2 164 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 LYSMD2Q8IV50 215 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 OR7A2PQ8NGA2 310 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 EGLN2Q96KS0 407 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 PRDM12Q9H4Q4 367 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 TMEM134Q9H6X4 195 aa15.67■□□□□ 0.1
CSNK1A1-202ENST00000377843 ACOT9Q9Y305 439 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms