RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 PCK1P35558 622 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 BCL2L1Q07817 233 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 SRSF6Q13247 344 aaKnown RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 DPYSQ14117 519 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 PIGHQ14442 188 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 TXNRD3NBQ6F5E7 133 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 OGFOD3Q6PK18 319 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 LIPIQ6XZB0 460 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 TMPRSS9Q7Z410 1059 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 PSTKQ8IV42 348 aaKnown RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 PDCD6IPQ8WUM4 868 aaKnown RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 SYN2Q92777 582 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 MED8Q96G25 268 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 CCNL2Q96S94 520 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 XPO4Q9C0E2 1151 aaKnown RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 MRPL40Q9NQ50 206 aaKnown RBP19.22■□□□□ 0.67
CBWD3-204ENST00000377349 IP6K2Q9UHH9 426 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 APPL1Q9UKG1 709 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 COL12A1Q99715 3063 aa19.22■□□□□ 0.67
CBWD3-204ENST00000377349 B8ZZF3 427 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 TRAFD1O14545 582 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-204ENST00000377349 RECQL5O94762 991 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-204ENST00000377349 RARAP10276 462 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 KRT10P13645 584 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 TRIM23P36406 574 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 INHBCP55103 352 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 ZFP36L1Q07352 338 aaKnown RBP19.21■□□□□ 0.67
CBWD3-204ENST00000377349 IL10RBQ08334 325 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 TGIF1Q15583 401 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 CERCAMQ5T4B2 595 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 ALKBH5Q6P6C2 394 aaKnown RBP19.21■□□□□ 0.67
CBWD3-204ENST00000377349 CCNJLQ8IV13 435 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 CCL4L1Q8NHW4 92 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 LGR4Q9BXB1 951 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 ETNK2Q9NVF9 386 aa19.21■□□□□ 0.67
CBWD3-204ENST00000377349 TNFP01375 233 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 LBRQ14739 615 aaKnown RBP19.2■□□□□ 0.66
CBWD3-204ENST00000377349 DPYSL2Q16555 572 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 BOLA3Q53S33 107 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 ZFYVE27Q5T4F4 411 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 TMCO4Q5TGY1 634 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 SPRED1Q7Z699 444 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 ATPAF2Q8N5M1 289 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 OR6C4Q8NGE1 309 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 OR56A4Q8NGH8 313 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 ATL2Q8NHH9 583 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 IQCDQ96DY2 449 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 CSPG4P5Q96PW8 444 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 TMEM168Q9H0V1 697 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 DEF6Q9H4E7 631 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 CTTNBP2NLQ9P2B4 639 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 SEPT3Q9UH03 358 aa19.2■□□□□ 0.66
CBWD3-204ENST00000377349 TMX2-CTNND1H3BSU7 103 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 MYO1FO00160 1098 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 HOXC4P09017 264 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-204ENST00000377349 GLB1P16278 677 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 ZNF135P52742 658 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-204ENST00000377349 CDH6P55285 790 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 SLC10A7Q0GE19 358 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 HLTFQ14527 1009 aaKnown RBP eCLIP19.19■□□□□ 0.66
CBWD3-204ENST00000377349 DPPA4Q7L190 304 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 POLNQ7Z5Q5 900 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 LZTR1Q8N653 840 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 ZNF564Q8TBZ8 553 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-204ENST00000377349 NSMCE1Q8WV22 266 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 TMEM74Q96NL1 305 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 STRADBQ9C0K7 418 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.19■□□□□ 0.66
CBWD3-204ENST00000377349 RNF215Q9Y6U7 377 aa19.19■□□□□ 0.66
CBWD3-204ENST00000377349 CYP1A2P05177 515 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 ELFN1P0C7U0 828 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 PNLIPP16233 465 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 ITIH1P19827 911 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 ETV5P41161 510 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 HCAR3P49019 387 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 RENBPP51606 427 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 NSUN2Q08J23 767 aaKnown RBP eCLIP19.18■□□□□ 0.66
CBWD3-204ENST00000377349 MMRN1Q13201 1228 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 RFTN1Q14699 578 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-204ENST00000377349 LINC00303Q3SY05 128 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 C14orf28Q4W4Y0 310 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 DENND2CQ68D51 928 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 SLITRK4Q8IW52 837 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.18■□□□□ 0.66
CBWD3-204ENST00000377349 Q8N9G6 341 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-204ENST00000377349 EXD3Q8N9H8 876 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 RNF214Q8ND24 703 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 FAM46DQ8NEK8 389 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 SPOCK2Q92563 424 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 PCDH18Q9HCL0 1135 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.18■□□□□ 0.66
CBWD3-204ENST00000377349 PISDQ9UG56 409 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 LOXL2Q9Y4K0 774 aa19.18■□□□□ 0.66
CBWD3-204ENST00000377349 UBR5O95071 2799 aaPredicted RBP19.18■□□□□ 0.66
CBWD3-204ENST00000377349 NBASA2RRP1 2371 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 PYCARD-AS1I3L0S3 204 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 CACNB4O00305 520 aaPredicted RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 TNFRSF10CO14798 259 aa19.17■□□□□ 0.66
CBWD3-204ENST00000377349 NVLO15381 856 aaKnown RBP19.17■□□□□ 0.66
CBWD3-204ENST00000377349 SERPINB6P35237 376 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms