RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 SPATS1Q496A3 300 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 PAN2Q504Q3 1202 aaKnown RBP10.69□□□□□ -0.7
ABCF1-202ENST00000376545 KANK2Q63ZY3 851 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 PPP4R4Q6NUP7 873 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 PTAR1Q7Z6K3 402 aaPredicted RBP10.69□□□□□ -0.7
ABCF1-202ENST00000376545 RETREG3Q86VR2 466 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 MON1AQ86VX9 555 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 SPATA2LQ8IUW3 424 aaPredicted RBP10.69□□□□□ -0.7
ABCF1-202ENST00000376545 MINDY1Q8N5J2 469 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 HDAC10Q969S8 669 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 EME1Q96AY2 570 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 PRPF18Q99633 342 aaKnown RBP10.69□□□□□ -0.7
ABCF1-202ENST00000376545 ALG9Q9H6U8 611 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 DUS2Q9NX74 493 aaKnown RBP10.69□□□□□ -0.7
ABCF1-202ENST00000376545 APPL1Q9UKG1 709 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 PADI3Q9ULW8 664 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 DNAJC15Q9Y5T4 150 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 GREB1Q4ZG55 1949 aa10.69□□□□□ -0.7
ABCF1-202ENST00000376545 MOXD2PA6NHM9 499 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 TRIM64CA6NLI5 447 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 GPC4O75487 556 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 MTHFD2P13995 350 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 PSMC3P17980 439 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 GRIK1P39086 918 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ALDH3B2P48448 385 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 PLK1P53350 603 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 DSC2Q02487 901 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 RALGDSQ12967 914 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 NHSL2Q5HYW2 709 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 CLEC6AQ6EIG7 209 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 NMD3Q96D46 503 aaKnown RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 SLC29A1Q99808 456 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 HOPXQ9BPY8 73 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ANKRD60Q9BZ19 345 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ZCWPW1Q9H0M4 648 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 AKTIPQ9H8T0 292 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ZNF408Q9H9D4 720 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 OLAHQ9NV23 265 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 CNOT6Q9ULM6 557 aaKnown RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 CEPT1Q9Y6K0 416 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ARHGEF37A1IGU5 675 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 FAM92AA1XBS5 289 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 SRP72O76094 671 aaKnown RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 CDK14O94921 469 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 HSD17B1P14061 328 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 AKR1A1P14550 325 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 MAXP61244 160 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ALFQ53S48 1182 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 COQ5Q5HYK3 327 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 ALG1LQ6GMV1 187 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 IYDQ6PHW0 289 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 PNPLA1Q8N8W4 532 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 TRPV1Q8NER1 839 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 OR9I1Q8NGQ6 314 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 MPP4Q96JB8 637 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 C8orf48Q96LL4 319 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 UPF3AQ9H1J1 476 aaKnown RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 FBRSL1Q9HCM7 1045 aaKnown RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 CCM2LQ9NUG4 571 aaPredicted RBP10.68□□□□□ -0.7
ABCF1-202ENST00000376545 FIS1Q9Y3D6 152 aa10.68□□□□□ -0.7
ABCF1-202ENST00000376545 IQCA1LA6NCM1 817 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TRIM64A6NGJ6 449 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 H3BNH8 94 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 CNTN5O94779 1100 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 EPOP01588 193 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ZNF23P17027 643 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PSMA3P25788 255 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ATP6V0D1P61421 351 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 IL10RBQ08334 325 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 MAP7Q14244 749 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TMEM259Q4ZIN3 620 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 MTX3Q5HYI7 312 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ZNF598Q86UK7 904 aaKnown RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PIM3Q86V86 326 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 MFSD2AQ8NA29 543 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 OR2T34Q8NGX1 318 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 OR2T3Q8NH03 318 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 HASPINQ8TF76 798 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PBXIP1Q96AQ6 731 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 KLHL5Q96PQ7 755 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ATOH8Q96SQ7 321 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 SPON1Q9HCB6 807 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 NUDT5Q9UKK9 219 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 MYOCOSA0A1B0GUC4 107 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 AQP12BA6NM10 295 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 F8W810 466 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 HTRA2O43464 458 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 SUPT7LO94864 414 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 OAZ2O95190 189 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 H6PDO95479 791 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 MOCS2O96007 188 aaPredicted RBP10.67□□□□□ -0.7
ABCF1-202ENST00000376545 CTSHP09668 335 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 TYSND1Q2T9J0 566 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 FAM219BQ5XKK7 198 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 PRMT9Q6P2P2 845 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 ERMP1Q7Z2K6 904 aa10.67□□□□□ -0.7
ABCF1-202ENST00000376545 LDB1Q86U70 411 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms