RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CCT8P50990 548 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 YPEL5P62699 121 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 INPP5AQ14642 412 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CDKN3Q16667 212 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 DBX2Q6ZNG2 339 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 RFLNAQ6ZTI6 216 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 Q6ZVL8 140 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 TECPR1Q7Z6L1 1165 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PIP4P1Q86T03 277 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 OXR1Q8N573 874 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 FAM71DQ8N9W8 422 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PLA2G15Q8NCC3 412 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 C1orf54Q8WWF1 131 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 MRGPRX2Q96LB1 330 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SPATA13Q96N96 652 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GORASP1Q9BQQ3 440 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 TMEM121Q9BTD3 319 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 FRMD8P1Q9BZ68 369 aaPredicted RBP21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 MAP1BP46821 2468 aaKnown RBP21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ADAMTS9Q9P2N4 1935 aa21■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SPTY2D1-AS1A0A0U1RR47 76 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 LOC285095A0A1B0GVY8 99 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 C5orf60A6NFR6 353 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 TOR1BO14657 336 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 LIASO43766 372 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SH3BP5O60239 455 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 KIF5CO60282 957 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CLDN7O95471 211 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 C1SP09871 688 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ZNF30P17039 623 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 BNIP3Q12983 259 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 MPP3Q13368 585 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PDE1CQ14123 709 aaPredicted RBP20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 FZD2Q14332 565 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SUZ12Q15022 739 aaKnown RBP20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SIX1Q15475 284 aaPredicted RBP20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CCDC70Q6NSX1 233 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 NUS1Q96E22 293 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 DTD2Q96FN9 168 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 APOOQ9BUR5 198 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CAAP1Q9H8G2 361 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 KCTD5Q9NXV2 234 aa20.99■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PCDHGA12O60330 932 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 EPOP01588 193 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 FGGP02679 453 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CSRP1P21291 193 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PSMB4P28070 264 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ARRB1P49407 418 aaPredicted RBP20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 STC1P52823 247 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GDF10P55107 478 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 MTM1Q13496 603 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 OASLQ15646 514 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PELI3Q8N2H9 469 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 DEFB124Q8NES8 71 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 IPMKQ8NFU5 416 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SAP25Q8TEE9 199 aa20.98■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CHD8Q9HCK8 2581 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 C1orf232A0A0U1RR37 186 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 YKT6O15498 198 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GCATO75600 419 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ANXA9O76027 345 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ATP1A1P05023 1023 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ATXN1LP0C7T5 689 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PIRTP0C851 137 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 EPHA8P29322 1005 aaPredicted RBP20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 THOP1P52888 689 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GEMP55040 296 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SNX1Q13596 522 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ZNF542PQ5EBM4 170 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ESRP1Q6NXG1 681 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PNCKQ6P2M8 343 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 GATAD2AQ86YP4 633 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CAMK1GQ96NX5 476 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ABCG8Q9H221 673 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 MAGEE1Q9HCI5 957 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 OR1A2Q9Y585 309 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ANKRD36A6QL64 1941 aa20.97■□□□□ 0.95
MAP1LC3A-202ENST00000374837 K7ESM1 405 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 KCNK5O95279 499 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ITGAVP06756 1048 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 STIP1P31948 543 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 TRIM23P36406 574 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CHRNA4P43681 627 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 EIF2B5Q13144 721 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PTK2BQ14289 1009 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PRPSAP1Q14558 356 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 CCNG2Q16589 344 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 LONRF2Q1L5Z9 754 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SIRPB2Q5JXA9 342 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 ARHGEF18Q6ZSZ5 1173 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 LYSMD3Q7Z3D4 306 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PARGQ86W56 976 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 NAXDQ8IW45 347 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SLC25A41Q8N5S1 370 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SETD7Q8WTS6 366 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 MAIP1Q8WWC4 291 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 EID2BQ96D98 161 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 PBKQ96KB5 322 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 SLC32A1Q9H598 525 aa20.96■□□□□ 0.95
MAP1LC3A-202ENST00000374837 DNAJC28Q9NX36 388 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms